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ar4r2_scaffold_707

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_707_1
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..287
DNA (285bp) protein (95aa)
50S ribosomal protein L21 n=1 Tax=Amphritea japonica RepID=UPI00036720D1
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
ar4r2_scaffold_707_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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308..565
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB8_HALNC
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_707_3
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

639..1715
DNA (1077bp) protein (359aa)
GTPase CgtA n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036D6BE5 rbh
obgE; GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
ar4r2_scaffold_707_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1724..2854
DNA (1131bp) protein (377aa)
glutamate 5-kinase (EC:2.7.2.11) rbh
Glutamate 5-kinase {ECO:0000255|HAMAP-Rule:MF_00456}; EC=2.7.2.11 {ECO:0000255|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000255|HAMAP-Rule:MF_00456}; Short=GK {ECO:0000255|HAMAP-Rule:MF_00456};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Glutamate 5-kinase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=PROB_THISH rbh
ar4r2_scaffold_707_5
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2907..5939)
DNA (3033bp) protein (1011aa)
Type I restriction endonuclease subunit R n=1 Tax=Marinobacter sp. EN3 RepID=U7H3S9_9ALTE rbh
Type I restriction endonuclease subunit R {ECO:0000313|EMBL:ERS03776.1}; TaxID=1397533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. EN3.;"
helicase, type I site-specific restriction-modification system restriction subunit rbh
ar4r2_scaffold_707_6
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5929..6966)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FI51_XANCI rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG38038.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
hypothetical protein rbh
ar4r2_scaffold_707_7
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6959..8326)
DNA (1368bp) protein (456aa)
Putative restriction modification system DNA specificity subunit n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GAK8_DESGI rbh
putative restriction modification system DNA specificity subunit rbh
Putative restriction modification system DNA specificity subunit {ECO:0000313|EMBL:AGW13151.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
ar4r2_scaffold_707_8
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8326..10545)
DNA (2220bp) protein (740aa)
DNA methyltransferase n=1 Tax=Marinobacter sp. EN3 RepID=U7H123_9ALTE rbh
DNA methyltransferase {ECO:0000313|EMBL:ERS03773.1}; TaxID=1397533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. EN3.;"
type I restriction-modification system DNA methylase (HsdM) rbh
ar4r2_scaffold_707_9
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10630..11817)
DNA (1188bp) protein (396aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
purT; phosphoribosylglycinamide formyltransferase 2 (EC:2.1.2.-) rbh
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JE10_9PSED rbh
ar4r2_scaffold_707_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11821..13110)
DNA (1290bp) protein (430aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13) rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX32_HALNC rbh
ar4r2_scaffold_707_11
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13215..13646
DNA (432bp) protein (144aa)
Large conductance mechanosensitive channel protein id=4717993 bin=GWC2_Pelobacter_58_13 species=Alcanivorax pacificus genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
large-conductance mechanosensitive channel
Tax=GWC2_Pelobacteraceae_58_13_curated
ar4r2_scaffold_707_12
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13705..14346
DNA (642bp) protein (214aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000255|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000255|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01208};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Orotate phosphoribosyltransferase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=PYRE_THISH
ar4r2_scaffold_707_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14611..15126)
DNA (516bp) protein (172aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Peptide deformylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVM2_HALNC
ar4r2_scaffold_707_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15128..15652)
DNA (525bp) protein (175aa)
Amino acid-binding ACT domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVM3_HALNC
amino acid-binding ACT domain-containing protein
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ACX96853.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_707_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15813..16661)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVM4_HALNC
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_707_16
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16658..17596)
DNA (939bp) protein (313aa)
Fructosamine/Ketosamine-3-kinase n=1 Tax=Marichromatium purpuratum 984 RepID=F9TYG7_MARPU
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
ar4r2_scaffold_707_17
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17593..18366)
DNA (774bp) protein (258aa)
Phospholipid/glycerol acyltransferase n=2 Tax=Methylovorus RepID=C6X7A6_METSD
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ACT51371.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
ar4r2_scaffold_707_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18623..19183)
DNA (561bp) protein (187aa)
Elongation factor P n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY96_HALNC rbh
translation elongation factor P rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_707_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19232..20380)
DNA (1149bp) protein (383aa)
Uncharacterized conserved protein UCP015557 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY97_HALNC rbh
hypothetical protein rbh
Uncharacterized conserved protein UCP015557 {ECO:0000313|EMBL:ACX95420.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_707_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20399..21670)
DNA (1272bp) protein (424aa)
sterol 3-beta-glucosyltransferase (EC:2.4.1.173) rbh
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00035C5224 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF81126.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ar4r2_scaffold_707_21
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21675..22793)
DNA (1119bp) protein (373aa)
O-methyltransferase, family 2 (EC:2.1.1.-) rbh
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037ADE65 rbh
O-methyltransferase family 2 {ECO:0000313|EMBL:EGW19648.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
ar4r2_scaffold_707_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23147..24016)
DNA (870bp) protein (290aa)
DNA gyrase inhibitor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIJ3_AZOSU rbh
DNA gyrase inhibitor rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ar4r2_scaffold_707_23
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24189..24851)
DNA (663bp) protein (221aa)
carboxylesterase (EC:3.1.1.1)
Carboxylesterase {ECO:0000313|EMBL:ABE50397.1}; EC=3.1.1.1 {ECO:0000313|EMBL:ABE50397.1};; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037C5D69
ar4r2_scaffold_707_24
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24879..25601
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A6Y0_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI57407.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
ar4r2_scaffold_707_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25639..26262)
DNA (624bp) protein (208aa)
Possible Transcriptional Regulator, TetR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIZ8_THIDA
TetR family transcriptional regulator
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97372.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ar4r2_scaffold_707_26
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26567..26998
DNA (432bp) protein (144aa)
Acriflavin resistance protein A n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P650_AROAE
acrA; acriflavin resistance protein A
Acriflavin resistance protein A {ECO:0000313|EMBL:CAI07211.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Displaying 26 items

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