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ar4r2_scaffold_1436

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1436_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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409..1296
DNA (888bp) protein (296aa)
ApbE family lipoprotein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X100_THIK1
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ADG30796.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
ar4r2_scaffold_1436_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1316..2140)
DNA (825bp) protein (275aa)
Ferric siderophore transporter n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZG71_AZOL4
tonB; Ferric siderophore transporter
Ferric siderophore transporter {ECO:0000313|EMBL:CBS90787.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
ar4r2_scaffold_1436_3
Sulfurimonas autotrophica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2151..2528)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003827995
TonB system transport protein ExbD
TonB system transport protein ExbD {ECO:0000313|EMBL:ADN08702.1}; TaxID=563040 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897; / OK10).;"
ar4r2_scaffold_1436_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2533..2961)
DNA (429bp) protein (143aa)
biopolymer transporter ExbB n=1 Tax=Thiothrix flexilis RepID=UPI0003706945
Outer membrane transport energization protein ExbB {ECO:0000313|EMBL:EIJ33581.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
tonB-system energizer ExbB
ar4r2_scaffold_1436_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3081..3605)
DNA (525bp) protein (175aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Ferritin Dps family protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAA6_9GAMM
ferritin
ar4r2_scaffold_1436_6
Acinetobacter guillouiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3690..5846)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Acinetobacter guillouiae NIPH 991 RepID=N8Y7R3_ACIGI rbh
Uncharacterized protein {ECO:0000313|EMBL:BAP36063.1}; TaxID=106649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter guillouiae (Acinetobacter genomosp. 11).;"
putative TonB-dependent receptor Porin rbh
ar4r2_scaffold_1436_7
Acinetobacter guillouiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5961..8204)
DNA (2244bp) protein (748aa)
Uncharacterized protein n=2 Tax=Acinetobacter guillouiae RepID=N8TK23_ACIGI rbh
Uncharacterized protein {ECO:0000313|EMBL:ENU58554.1}; TaxID=1217655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter guillouiae CIP 63.46.;"
hypothetical protein rbh
ar4r2_scaffold_1436_8
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(8254..9057)
DNA (804bp) protein (268aa)
Hemin import ATP-binding protein HmuV {ECO:0000255|HAMAP-Rule:MF_01718}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01718};; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
Hemin import ATP-binding protein HmuV n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=HMUV_GLOVI
hemin ABC transporter ATP binding protein
ar4r2_scaffold_1436_9
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9054..10145)
DNA (1092bp) protein (364aa)
Hemin ABC transporter, permease protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DRT3_THIND
hmuU_[H]; Hemin ABC transporter, permease protein
Hemin ABC transporter, permease protein {ECO:0000313|EMBL:AGA32299.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
ar4r2_scaffold_1436_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10149..11027)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI00036CC10D
ABC-type hemin transport system, periplasmic component {ECO:0000313|EMBL:CDM64291.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
chuT; periplasmic-binding protein
ar4r2_scaffold_1436_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11024..12136)
DNA (1113bp) protein (371aa)
heme ABC transporter n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B62600 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23950.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
ar4r2_scaffold_1436_12
unknown

Not on your lists

comp(12391..12618)
DNA (228bp) protein (76aa)

This feature has no annotations

ar4r2_scaffold_1436_13
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12835..13965)
DNA (1131bp) protein (377aa)
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193) rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LAE4_TOLAT rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jadensis T9.;"
ar4r2_scaffold_1436_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13949..15121)
DNA (1173bp) protein (391aa)
hypothetical protein n=2 Tax=unclassified Zetaproteobacteria RepID=UPI0003804E16
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97362.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ar4r2_scaffold_1436_15
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15142..15606)
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HWS2_PSEUO
NrdR family transcriptional regulator
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
ar4r2_scaffold_1436_16
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15725..16303)
DNA (579bp) protein (193aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Marichromatium purpuratum 984 RepID=F9TVR6_MARPU
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Displaying 16 items

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