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ar4r2_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_175_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2529
DNA (2529bp) protein (843aa)
CheA signal transduction histidine kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY49_HALNC rbh
CheA signal transduction histidine kinase rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ACX95372.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_175_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2526..2981
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY50_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95373.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_175_3
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3271..3984)
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZEN3_9GAMM
hypothetical protein
ar4r2_scaffold_175_4
unknown

Not on your lists

comp(3981..4175)
DNA (195bp) protein (65aa)

This feature has no annotations

ar4r2_scaffold_175_5
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4172..5560)
DNA (1389bp) protein (463aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62) rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E6J7_9GAMM rbh
ar4r2_scaffold_175_6
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5523..6089)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q602F2_METCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU90773.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
ar4r2_scaffold_175_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6037..7068)
DNA (1032bp) protein (344aa)
Band 7 protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXV0_HALNC rbh
hypothetical protein rbh
Band 7 protein {ECO:0000313|EMBL:ACX95273.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_175_8
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7301..8161)
DNA (861bp) protein (287aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20) rbh
Methylenetetrahydrofolate reductase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GP49_THISH rbh
ar4r2_scaffold_175_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8164..8541)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AY7_SOLUE
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ar4r2_scaffold_175_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8554..9945)
DNA (1392bp) protein (464aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1) rbh
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Adenosylhomocysteinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXU8_HALNC rbh
ar4r2_scaffold_175_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10161..11321)
DNA (1161bp) protein (387aa)
S-adenosylmethionine synthetase (EC:2.5.1.6) rbh
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
S-adenosylmethionine synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXU7_HALNC rbh
ar4r2_scaffold_175_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11685..12503)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXU5_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95268.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_175_13
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12846..14843
DNA (1998bp) protein (666aa)
transketolase (EC:2.2.1.1) rbh
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Transketolase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J33_THICR rbh
ar4r2_scaffold_175_14
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14920..15924
DNA (1005bp) protein (335aa)
cbbG; Glyceraldehyde-3-phosphate dehydrogenase A (GAPDH-A) (EC:1.2.1.12) rbh
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI000262501D rbh
Tax=RBG_16_Betaproteobacteria_58_11_curated
ar4r2_scaffold_175_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16087..17283
DNA (1197bp) protein (399aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3) rbh
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphoglycerate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXU1_HALNC rbh
ar4r2_scaffold_175_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17504..18952
DNA (1449bp) protein (483aa)
pyruvate kinase (EC:2.7.1.40) rbh
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Pyruvate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXU0_HALNC rbh
ar4r2_scaffold_175_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19044..20108
DNA (1065bp) protein (355aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13) rbh
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype {ECO:0000313|EMBL:ACX95262.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACX95262.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXT9_HALNC rbh
ar4r2_scaffold_175_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20282..23716
DNA (3435bp) protein (1145aa)
hypothetical protein id=12498229 bin=THIO_MID species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46483.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
ar4r2_scaffold_175_19
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23887..25026)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000370EF48 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABW67192.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
ar4r2_scaffold_175_20
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25173..26408)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DK37_METS0 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADI28422.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
ar4r2_scaffold_175_21
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26529..27353)
DNA (825bp) protein (275aa)
20S proteasome subunits A and B; K07395 putative proteasome-type protease id=12498247 bin=THIO_MID species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
20S proteasome subunits A and B
20S proteasome subunits A and B {ECO:0000313|EMBL:BAP89957.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
ar4r2_scaffold_175_22
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27492..28934
DNA (1443bp) protein (481aa)
hypothetical protein id=12498220 bin=THIO_MID species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
protein of unknown function DUF404
Tax=GWF2_Sideroxydans_59_14_curated
ar4r2_scaffold_175_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28934..29887
DNA (954bp) protein (318aa)
hypothetical protein id=12498221 bin=THIO_MID species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ar4r2_scaffold_175_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29924..30235
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZF2_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95825.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_175_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30286..30978
DNA (693bp) protein (231aa)
mobilization protein n=1 Tax=Nevskia ramosa RepID=UPI0003B687CE
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ar4r2_scaffold_175_26
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30960..31622)
DNA (663bp) protein (221aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
dethiobiotin synthase (EC:6.3.3.3)
dethiobiotin synthase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6292F
ar4r2_scaffold_175_27
RIFOXYD2_FULL_Sideroxydans_59_7_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31778..32443)
DNA (666bp) protein (222aa)
Carbonic anhydrase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XTN6_DESMR
carbonic anhydrase
Tax=RIFOXYD2_FULL_Sideroxydans_59_7_curated
ar4r2_scaffold_175_28
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32468..33355)
DNA (888bp) protein (296aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6) rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000255|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000255|HAMAP-Rule:MF_00137}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=PUR7_THISH rbh
ar4r2_scaffold_175_29
unknown

Not on your lists

comp(33451..33642)
DNA (192bp) protein (64aa)

This feature has no annotations

ar4r2_scaffold_175_30
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33721..33951)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Z5_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96718.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 58 in total

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