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ar4r2_scaffold_800

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_800_1
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..522)
DNA (522bp) protein (174aa)
Transposase ISRme5 (Copy a, CMGI-2) n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNZ0_RALME
tnpA; transposase ISRme5 (copy b, CMGI-2)
Transposase ISRme5 (Copy b, CMGI-2) {ECO:0000313|EMBL:ABF08165.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
ar4r2_scaffold_800_2
unknown

Not on your lists

comp(598..768)
DNA (171bp) protein (57aa)

This feature has no annotations

ar4r2_scaffold_800_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1048..1977
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYG7_HALNC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACX95490.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_800_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1978..2469
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9Z3_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24977.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ar4r2_scaffold_800_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2662..3189
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CXQ8_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
ar4r2_scaffold_800_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3230..3538
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000365B7F4
Hypothetical protein
Plasmid pAcX50e, complete sequence {ECO:0000313|EMBL:AJE23606.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
ar4r2_scaffold_800_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3620..4141)
DNA (522bp) protein (174aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L210_HALNC
molybdenum cofactor biosynthesis protein B
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_800_8
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4138..4857)
DNA (720bp) protein (240aa)
Membrane protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LND6_RUEPO
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_800_9
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4908..6248)
DNA (1341bp) protein (447aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
ribosomal protein S12 methylthiotransferase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B5D102 rbh
MiaB-like tRNA modifying protein YliG rbh
ar4r2_scaffold_800_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6238..6552)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L213_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96736.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_800_11
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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6629..7150
DNA (522bp) protein (174aa)
Asparaginase/glutaminase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WZ81_NITSE
asparaginase/glutaminase
Asparaginase/glutaminase {ECO:0000313|EMBL:ADV46593.1}; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1).;"
ar4r2_scaffold_800_12
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7303..7869
DNA (567bp) protein (189aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
deoxycytidine triphosphate deaminase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000375CE60 rbh
ar4r2_scaffold_800_13
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7944..8597)
DNA (654bp) protein (218aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABK7_ALKEH
HAD family hydrolase
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:ABI55780.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
ar4r2_scaffold_800_14
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8726..9259
DNA (534bp) protein (178aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
RNA pyrophosphohydrolase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G116_9GAMM
RNA pyrophosphohydrolase
ar4r2_scaffold_800_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9256..11556
DNA (2301bp) protein (767aa)
PTSINtr with GAF domain, PtsP n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZF6_HALNC rbh
protein PtsP rbh
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:ACX95829.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_800_16
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11820..13313)
DNA (1494bp) protein (498aa)
polyphosphate-dependent AMP kinase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003823C80 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL71583.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ar4r2_scaffold_800_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13643..14686
DNA (1044bp) protein (348aa)
Phosphate-binding protein PstS n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CVW2_STEMA rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
phosphate ABC transporter substrate-binding protein rbh
ar4r2_scaffold_800_18
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14798..15808
DNA (1011bp) protein (337aa)
Phosphate ABC transporter inner membrane subunit PstC n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DBG0_9ALTE rbh
Phosphate ABC transporter inner membrane subunit PstC {ECO:0000313|EMBL:EMP54992.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
phosphate ABC transporter inner membrane subunit PstC rbh
ar4r2_scaffold_800_19
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15821..16660
DNA (840bp) protein (280aa)
Phosphate ABC transporter inner membrane subunit PstA n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CMY4_9ALTE rbh
Phosphate ABC transporter inner membrane subunit PstA {ECO:0000313|EMBL:EMP54991.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
phosphate ABC transporter permease rbh
ar4r2_scaffold_800_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16687..17565
DNA (879bp) protein (293aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphate ABC transporter, ATPase subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P4_HALNC rbh
phosphate ABC transporter ATPase rbh
ar4r2_scaffold_800_21
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17770..18477)
DNA (708bp) protein (236aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWC5_9GAMM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
phosphate uptake regulator PhoU
ar4r2_scaffold_800_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18653..20755
DNA (2103bp) protein (701aa)
polyphosphate kinase (EC:2.7.4.1) rbh
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Polyphosphate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB5_HALNC rbh
ar4r2_scaffold_800_23
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20852..22348)
DNA (1497bp) protein (499aa)
Ppx/GppA phosphatase {ECO:0000313|EMBL:EGV19509.1}; EC=3.6.1.40 {ECO:0000313|EMBL:EGV19509.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
guanosine-5'-triphosphate,3'-diphosphate diphosphatase (EC:3.6.1.40) rbh
Ppx/GppA phosphatase n=1 Tax=Thiocapsa marina 5811 RepID=F9U897_9GAMM rbh
ar4r2_scaffold_800_24
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22877..23389)
DNA (513bp) protein (171aa)
Putative phosphohistidine phosphatase, SixA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7E2_ANADF
putative phosphohistidine phosphatase SixA
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ABS24638.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
ar4r2_scaffold_800_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23391..25160)
DNA (1770bp) protein (590aa)
Putative sulfate permease n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MN06_PSEPS rbh
Putative sulfate permease {ECO:0000313|EMBL:ELS29277.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
putative SulP family transporter rbh
ar4r2_scaffold_800_26
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25171..25524)
DNA (354bp) protein (118aa)
Glucosyltransferase MdoH n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LX42_DESBD
glucosyltransferase MdoH
Glucosyltransferase MdoH {ECO:0000313|EMBL:ACU88715.1}; Flags: Precursor;; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
Displaying 26 items

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