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ar4r2_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_516_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

310..2871
DNA (2562bp) protein (854aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3) rbh
Aconitate hydratase 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZM7_HALNC rbh
ar4r2_scaffold_516_2
unknown

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2889..3563
DNA (675bp) protein (225aa)

This feature has no annotations

ar4r2_scaffold_516_trna_1
unknown

Not on your lists

3659..3732
DNA (74bp)
transferRNA Pro
ar4r2_scaffold_516_3
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4044..4658)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BYG8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS72884.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
hypothetical protein
ar4r2_scaffold_516_4
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5074..7158)
DNA (2085bp) protein (695aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QNK2_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:EMI08840.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
ar4r2_scaffold_516_5
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7151..7483)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BTG2_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEM58188.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris.;"
ar4r2_scaffold_516_6
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7487..7720)
DNA (234bp) protein (78aa)
phage transcriptional regulator, AlpA
Uncharacterized protein {ECO:0000313|EMBL:EWH03227.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
ar4r2_scaffold_516_7
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8069..9301)
DNA (1233bp) protein (411aa)
Phage integrase n=1 Tax=mine drainage metagenome RepID=E6PQA2_9ZZZZ rbh
Prophage CP4-57 integrase {ECO:0000313|EMBL:KFZ90758.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
integrase rbh
ar4r2_scaffold_516_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9736..10230)
DNA (495bp) protein (165aa)
Ferritin Dps family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L032_HALNC
ferritin
Ferritin Dps family protein {ECO:0000313|EMBL:ACX96055.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_516_9
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10548..12458)
DNA (1911bp) protein (637aa)
YoaA n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DEC8_9GAMM rbh
helicase c2 rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_516_10
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12468..13229)
DNA (762bp) protein (254aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TYS6_MARPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02787.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
ar4r2_scaffold_516_11
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13295..15634)
DNA (2340bp) protein (780aa)
Penicillin-binding protein 1B n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BRV4_9GAMM rbh
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
penicillin-binding protein 1B rbh
ar4r2_scaffold_516_12
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15730..17307
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E2B5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGZ49848.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
Uma3 rbh
ar4r2_scaffold_516_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17396..17923)
DNA (528bp) protein (176aa)
Protein-tyrosine-phosphatase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y890_THIV6
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:CDH44022.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
protein-tyrosine-phosphatase
ar4r2_scaffold_516_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18287..18703
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZK9_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95882.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_516_15
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18771..19523
DNA (753bp) protein (251aa)
molybdopterin biosynthesis protein MoeB n=1 Tax=Pseudomonas pelagia RepID=UPI0003B5F4F7
moeB; molybdopterin biosynthesis protein MoeB
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ar4r2_scaffold_516_16
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19527..19847
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSS5_THIA3
hypothetical protein; putative membrane protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
ar4r2_scaffold_516_17
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19861..22434
DNA (2574bp) protein (858aa)
DNA mismatch repair protein MutS n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C57FB rbh
DNA mismatch repair protein MutS {ECO:0000313|EMBL:AKH21913.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
DNA mismatch repair protein MutS rbh
ar4r2_scaffold_516_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22993..24405)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMI8_KORVE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF41912.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
ar4r2_scaffold_516_trna_2
unknown

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comp(24672..24744)
DNA (73bp)
transferRNA Pseudo
ar4r2_scaffold_516_19
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25186..25629
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00035C9D59
hypothetical protein
Tax=GWA2_Gallionellales_60_18_curated
ar4r2_scaffold_516_20
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25826..26149
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7D8K9_9ALTE
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:EHJ05938.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
ar4r2_scaffold_516_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26201..27916
DNA (1716bp) protein (572aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Glutamine--tRNA ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L033_HALNC rbh
glutaminyl-tRNA synthetase rbh
ar4r2_scaffold_516_22
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27951..28502
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLD2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDM84813.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
dihydrofolate reductase
ar4r2_scaffold_516_23
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28635..28946
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Serratia plymuthica 4Rx13 RepID=S0ADD8_SERPL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGO55138.1}; TaxID=682634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica 4Rx13.;"
ar4r2_scaffold_516_24
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29041..32643
DNA (3603bp) protein (1201aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
UvrD/REP helicase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYP1_NITHN rbh
UvrD/REP helicase rbh
ar4r2_scaffold_516_25
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32839..33342
DNA (504bp) protein (168aa)
UPF0114 protein C666_02450 n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7H1_9RHOO
UPF0114 protein C666_02450 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
ar4r2_scaffold_516_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33491..34975)
DNA (1485bp) protein (495aa)
dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Nevskia ramosa RepID=UPI0003B53E68 rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:EIJ35568.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
glycosyl transferase family protein rbh
ar4r2_scaffold_516_27
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35078..36652
DNA (1575bp) protein (525aa)
Glycosyl transferase family 39 n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FBJ7_9GAMM rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:EGW55678.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
glycosyl transferase family 39 rbh
ar4r2_scaffold_516_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36636..38180
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003605AD9
Glucans biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_01068}; Flags: Precursor;; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
mdoD; glucan biosynthesis protein D
Displaying items 1-30 of 45 in total

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