ggKbase home page

ar4r2_scaffold_2387

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2387_1
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..645
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036DC9CB
GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWA2_Gallionellales_55_18_curated
ar4r2_scaffold_2387_2
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

649..1482
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDP9_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF79717.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_3
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1737..2564
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDS0_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF79737.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2658..3635
DNA (978bp) protein (326aa)
Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8C6_DESSD
amino acid ABC transporter substrate-binding protein, PAAT family
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:AGF79738.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_5
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3654..4193
DNA (540bp) protein (180aa)
dCMP deaminase (EC:3.5.4.12)
dCMP deaminase {ECO:0000313|EMBL:ADW17623.1}; EC=3.5.4.12 {ECO:0000313|EMBL:ADW17623.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
dCMP deaminase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJY2_DESPD
ar4r2_scaffold_2387_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4351..5355)
DNA (1005bp) protein (335aa)
Thiamine-monophosphate kinase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJK1_DESSD rbh
thiamine-phosphate kinase rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ar4r2_scaffold_2387_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5729..6151)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PTR0_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF79741.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_8
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6188..7930)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDS5_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF79742.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_9
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8098..8706)
DNA (609bp) protein (203aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PSR5_DESSD
D,D-heptose 1,7-bisphosphate phosphatase
ar4r2_scaffold_2387_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8727..9911)
DNA (1185bp) protein (395aa)
Lipopolysaccharide heptosyltransferase II n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PIE4_DESSD rbh
lipopolysaccharide heptosyltransferase II rbh
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:AGF79365.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9968..11716)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NIG9_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF79364.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11922..13133)
DNA (1212bp) protein (404aa)
EAL and modified HD-GYP domain-containing putative signal transduction protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7B1_DESSD rbh
EAL and modified HD-GYP domain-containing putative signal transduction protein rbh
EAL and modified HD-GYP domain-containing putative signal transduction protein {ECO:0000313|EMBL:AGF79363.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_13
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13376..13867)
DNA (492bp) protein (164aa)
ATPase, YjeE family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PCM2_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KGO34455.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
ATPase, YjeE family
ar4r2_scaffold_2387_14
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13873..15696)
DNA (1824bp) protein (608aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PID9_DESSD rbh
ABC-type oligopeptide transport system, periplasmic component rbh
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:AGF79360.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_15
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16294..17580
DNA (1287bp) protein (429aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NIG3_DESSD rbh
homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit rbh
ar4r2_scaffold_2387_16
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17608..18156
DNA (549bp) protein (183aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7A5_DESSD
3-isopropylmalate dehydratase {ECO:0000313|EMBL:KGO34353.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
3-isopropylmalate dehydratase small subunit
ar4r2_scaffold_2387_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18446..21052
DNA (2607bp) protein (869aa)
Glycosyl transferase family 2 id=1724191 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
exo-beta-1,3-glucanase rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
ar4r2_scaffold_2387_18
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21623..21886
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6K9_GEOUR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
ar4r2_scaffold_2387_19

Not on your lists

21891..22166
DNA (276bp) protein (92aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1YLD1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD37971.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_2387_20
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22788..23801)
DNA (1014bp) protein (338aa)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z017_DESAT rbh
Inositol phosphatase/fructose-16-bisphosphatase rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
ar4r2_scaffold_2387_21
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23923..25488)
DNA (1566bp) protein (522aa)
Probable cytosol aminopeptidase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PTI6_DESSD rbh
leucyl aminopeptidase rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_22
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25964..27028
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJZ2_DESPS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAG37334.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
ar4r2_scaffold_2387_23
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27327..29642
DNA (2316bp) protein (772aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NBW1_DESAR
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AEB08038.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
ar4r2_scaffold_2387_24
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29909..30838)
DNA (930bp) protein (310aa)
Integrase {ECO:0000313|EMBL:KGO34354.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
Heat shock protein DnaJ domain protein id=2183245 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
Zn finger domain-containing DnaJ-class molecular chaperone rbh
ar4r2_scaffold_2387_25
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31744..32172)
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PSQ3_DESSD
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
single stranded DNA-binding protein
ar4r2_scaffold_2387_26
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32335..33465)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PID3_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF79355.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2387_27
unknown

Not on your lists

33828..33965
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 27 items

View Taxonomy