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ar4r2_scaffold_4479

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_4479_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..823)
DNA (822bp) protein (274aa)
Peptide chain release factor 3 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NK24_DESSD rbh
bacterial peptide chain release factor 3 (bRF-3) rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_4479_2
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1086..2432)
DNA (1347bp) protein (449aa)
Type I secretion outer membrane protein id=3929919 bin=GWF2_Nitrospirae_44_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
type I secretion outer membrane protein rbh
Tax=CG_Delta_06
ar4r2_scaffold_4479_3
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2398..5535)
DNA (3138bp) protein (1046aa)
Efflux pump, RND family, inner membrane protein, AcrB/AcrD/AcrF family id=4122897 bin=GWC2_Pelobacter_58_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
acriflavine resistance protein B
Tax=CG_Delta_06
ar4r2_scaffold_4479_4
unknown

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comp(5522..5680)
DNA (159bp) protein (53aa)

This feature has no annotations

ar4r2_scaffold_4479_5
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5929..7071)
DNA (1143bp) protein (381aa)
Efflux pump, RND family, membrane fusion protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q749G2_GEOSL rbh
RND family efflux pump membrane fusion protein rbh
Tax=CG_Delta_06
ar4r2_scaffold_4479_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7105..7752)
DNA (648bp) protein (216aa)
Transcriptional regulator, TetR family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G787_GEOUR
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ27655.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
ar4r2_scaffold_4479_7
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

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8188..9474
DNA (1287bp) protein (429aa)
Enolase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YYQ2_DESAF rbh
enolase rbh
Tax=RBG_16_Spirochaetes_49_21_curated
ar4r2_scaffold_4479_8
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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10535..13786
DNA (3252bp) protein (1084aa)
Parallel beta-helix repeat n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZT09_DESOH
Fibronectin type III domain protein {ECO:0000313|EMBL:GAN31658.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
parallel beta-helix repeat-containing protein
ar4r2_scaffold_4479_9
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14288..14989)
DNA (702bp) protein (234aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PHH4_DESSD rbh
ATP-dependent protease HslVU, ATPase subunit rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Displaying 9 items

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