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ar4r2_scaffold_1273

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1273_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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183..2141
DNA (1959bp) protein (653aa)
DNA mismatch repair protein MutL n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NZE5_DESSD rbh
DNA mismatch repair protein MutL rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1273_2
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2123..2728
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1N9U4_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF76629.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1273_3
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3000..5357)
DNA (2358bp) protein (786aa)
PKD domain-containing protein id=24547293 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Putative secreted protein {ECO:0000313|EMBL:AKA36092.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
cell surface protein
ar4r2_scaffold_1273_4
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5928..6740)
DNA (813bp) protein (271aa)
General secretory system II protein E domain protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJQ3_DESPD
Uncharacterized protein {ECO:0000313|EMBL:KJS00641.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
general secretory system II protein E domain-containing protein
ar4r2_scaffold_1273_5
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7023..7190)
DNA (168bp) protein (56aa)
hypothetical protein id=2183235 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_1273_6
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7415..8332)
DNA (918bp) protein (306aa)
OmpA/MotB domain protein id=3929044 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
OmpA/MotB domain-containing protein
Tax=GWC2_Geobacteraceae_55_20_curated
ar4r2_scaffold_1273_7
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8329..9114)
DNA (786bp) protein (262aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0G6_GEODF
MotA/TolQ/ExbB proton channel
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
ar4r2_scaffold_1273_8
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9294..9509)
DNA (216bp) protein (72aa)
Flagellar FlbD family protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E7J4_GEOSM
Uncharacterized protein {ECO:0000313|EMBL:GAM09666.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
flagellar protein FlbD
ar4r2_scaffold_1273_9
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9812..10906)
DNA (1095bp) protein (365aa)
Methyltransferase type 12 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E8N0_GEOLS rbh
type 12 methyltransferase rbh
Methyltransferase type 12 {ECO:0000313|EMBL:ACD96706.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
ar4r2_scaffold_1273_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10972..11643)
DNA (672bp) protein (224aa)
nicotinate/nicotinamide nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P788_DESSD
ar4r2_scaffold_1273_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11640..12923)
DNA (1284bp) protein (428aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41) rbh
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Gamma-glutamyl phosphate reductase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PCK2_DESSD rbh
ar4r2_scaffold_1273_12

Not on your lists

comp(12938..14197)
DNA (1260bp) protein (420aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutamate 5-kinase n=1 Tax=uncultured bacterium RepID=K1Y8N7_9BACT rbh
glutamate 5-kinase rbh
ar4r2_scaffold_1273_13

Not on your lists

comp(14139..15194)
DNA (1056bp) protein (352aa)
GTPase Obg n=1 Tax=uncultured bacterium RepID=K1Y969_9BACT rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Obg family GTPase CgtA rbh
ar4r2_scaffold_1273_14
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15645..15902)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IM27_9DELT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;" source="uncultured Desulfofustis sp. PB-SRB1.;"
rpmA; 50S ribosomal protein L27
ar4r2_scaffold_1273_15
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16000..16311)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P780_DESSD
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
LSU ribosomal protein L21P
ar4r2_scaffold_1273_16
unknown

Not on your lists

16344..16502
DNA (159bp) protein (53aa)

This feature has no annotations

ar4r2_scaffold_1273_17
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16555..17706
DNA (1152bp) protein (384aa)
Conserved hypothetical integral membrane protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PBR7_DESSD rbh
hypothetical protein rbh
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:AGF79072.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1273_18
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17865..18620
DNA (756bp) protein (252aa)
ABC transporter related n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKZ4_SYNFM rbh
ABC transporter-like protein rbh
ABC transporter related {ECO:0000313|EMBL:ABK18096.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
ar4r2_scaffold_1273_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18665..19708
DNA (1044bp) protein (348aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PHI9_DESSD
ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:AGF79070.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1273_20
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19705..20322
DNA (618bp) protein (206aa)
Uncharacterized protein id=4021034 bin=GWC2_Geobacteraceae_55_20 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
lipoprotein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
ar4r2_scaffold_1273_21
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20319..21125
DNA (807bp) protein (269aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PHI5_DESSD rbh
sugar phosphate isomerase/epimerase rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGF79065.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1273_22
unknown

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21274..21522
DNA (249bp) protein (83aa)

This feature has no annotations

ar4r2_scaffold_1273_23
unknown

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21572..21682
DNA (111bp) protein (37aa)

This feature has no annotations

ar4r2_scaffold_1273_24
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21628..22242)
DNA (615bp) protein (205aa)
ABC-type uncharacterized transport system auxiliary component-like protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SVF5_PSYIN
ABC transporter auxiliary component-like protein
Tax=CG_Mariprof_02
ar4r2_scaffold_1273_25
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22232..23125)
DNA (894bp) protein (298aa)
Mammalian cell entry related domain protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SVF6_PSYIN
hypothetical protein
Tax=CG_Mariprof_02
ar4r2_scaffold_1273_26
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23109..23720)
DNA (612bp) protein (204aa)
ABC transporter ATP-binding protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SVF7_PSYIN
ABC transporter ATP-binding protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43816.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Displaying 26 items

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