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ar4r2_scaffold_2835

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2835_1
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..560)
DNA (558bp) protein (186aa)
apurinic endonuclease APN1 (EC:3.1.21.-)
Probable endonuclease 4 id=1894088 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_2835_2

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comp(583..2454)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y5A5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD38070.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Zn-dependent protease with chaperone function rbh
ar4r2_scaffold_2835_3
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2918..3313)
DNA (396bp) protein (132aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJI9_DESPD
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ADW18632.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_2835_4
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3345..4376)
DNA (1032bp) protein (344aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VGH6_DESVV
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:KHK03061.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
ar4r2_scaffold_2835_trna_1
unknown

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4671..4743
DNA (73bp)
transferRNA Met
ar4r2_scaffold_2835_5
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4947..5756
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS02510.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Putative uncharacterized protein id=1894084 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
dinuclear metal center protein, YbgI/SA1388 family
ar4r2_scaffold_2835_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5895..6614
DNA (720bp) protein (240aa)
Zn-ribbon protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NDI1_DESSD
Zn-ribbon protein
Zn-ribbon protein {ECO:0000313|EMBL:AGF77814.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2835_7
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7370..8572
DNA (1203bp) protein (401aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) rbh
Bifunctional enzyme IspD/IspF n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDL0_DESSD rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
ar4r2_scaffold_2835_8
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8569..9768
DNA (1200bp) protein (400aa)
Peptidase T-like protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PMZ5_DESSD rbh
peptidase T-like protein rbh
Peptidase T-like protein {ECO:0000313|EMBL:AGF77816.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2835_9
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9910..10485)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SP13_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFI34489.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
hypothetical protein
Displaying 10 items

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