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ar4r2_scaffold_1510

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1510_1
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
Elongation factor Tu n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDU2_DESPD
translation elongation factor 1A (EF-1A/EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_1510_2
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(516..2594)
DNA (2079bp) protein (693aa)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Elongation factor G 2 id=2014476 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
translation elongation factor 2 (EF-2/EF-G) rbh
ar4r2_scaffold_1510_3
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2683..3156)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PAB8_DESSD
SSU ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1510_4
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3746..7795)
DNA (4050bp) protein (1350aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RPOC_DESPS rbh
DNA-directed RNA polymerase, beta' subunit rbh
ar4r2_scaffold_1510_5
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7894..11973)
DNA (4080bp) protein (1360aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NFZ9_DESSD rbh
DNA-directed RNA polymerase, beta subunit rbh
ar4r2_scaffold_1510_6
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12341..12727)
DNA (387bp) protein (129aa)
50S ribosomal protein L7/L12 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDU9_DESPD
50S ribosomal protein L12
Tax=BJP_IG2102_Syntrophobacterales_60_12
ar4r2_scaffold_1510_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12811..13338)
DNA (528bp) protein (176aa)
50S ribosomal protein L10 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PAB4_DESSD
ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1510_8
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13590..14294)
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RL1_DESPS rbh
rplA; 50S ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
ar4r2_scaffold_1510_9
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14910..15443)
DNA (534bp) protein (178aa)
Transcription antitermination protein nusG id=2014556 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
transcription antitermination protein NusG rbh
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_1510_10
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15603..15857)
DNA (255bp) protein (85aa)
Preprotein translocase, SecE subunit id=2014559 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
preprotein translocase, SecE subunit
ar4r2_scaffold_1510_trna_1
unknown

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comp(15936..16008)
DNA (73bp)
transferRNA Trp
ar4r2_scaffold_1510_11
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16241..16780)
DNA (540bp) protein (180aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu 1 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=EFTU1_DESPS
Elongation factor Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
Displaying 12 items

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