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ar4r2_scaffold_731

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_731_1
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..294)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YCI3_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX28277.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
ar4r2_scaffold_731_2
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(742..2442)
DNA (1701bp) protein (567aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18) rbh
Glutamine--tRNA ligase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PRQ8_DESSD rbh
ar4r2_scaffold_731_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2561..4039)
DNA (1479bp) protein (493aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
glutamyl-tRNA synthetase (EC:6.1.1.17) rbh
Glutamate--tRNA ligase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PBM7_DESSD rbh
ar4r2_scaffold_731_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4531..6126
DNA (1596bp) protein (532aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AGF79029.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AGF79029.1};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
D-3-phosphoglycerate dehydrogenase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NHE9_DESSD rbh
ar4r2_scaffold_731_5

Not on your lists

6183..6503
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XXU4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD35430.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function (DUF1844)
ar4r2_scaffold_731_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6633..7406
DNA (774bp) protein (258aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PRR2_DESSD
ar4r2_scaffold_731_trna_1
unknown

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7407..7478
DNA (72bp)
transferRNA Gln
ar4r2_scaffold_731_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7524..8462
DNA (939bp) protein (313aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PBN3_DESSD rbh
ribose-phosphate pyrophosphokinase rbh
ar4r2_scaffold_731_8
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8583..9146
DNA (564bp) protein (188aa)
50S ribosomal protein L25 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6G7_DESSD
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
ribosomal protein L25, Ctc-form
ar4r2_scaffold_731_9
unknown

Not on your lists

comp(9094..9363)
DNA (270bp) protein (90aa)

This feature has no annotations

ar4r2_scaffold_731_10
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9439..9831
DNA (393bp) protein (131aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=1924501 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
ar4r2_scaffold_731_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10203..10682
DNA (480bp) protein (160aa)
CarD-like transcriptional regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PHF5_DESSD
CarD-like transcriptional regulator
CarD-like transcriptional regulator {ECO:0000313|EMBL:AGF79035.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_731_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10766..11752
DNA (987bp) protein (329aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Pseudouridine synthase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PRR6_DESSD rbh
ar4r2_scaffold_731_13
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11749..12354
DNA (606bp) protein (202aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase id=4359707 bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
ar4r2_scaffold_731_14
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13076..14326
DNA (1251bp) protein (417aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
Transcription termination factor Rho n=1 Tax=uncultured bacterium RepID=K1YK44_9BACT rbh
transcription termination factor Rho rbh
ar4r2_scaffold_731_15
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14514..14732
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RL31_DESPS
ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
ar4r2_scaffold_731_16
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14937..16004
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=uncultured bacterium RepID=K1ZI91_9BACT rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
bacterial peptide chain release factor 1 (bRF-1) rbh
ar4r2_scaffold_731_17
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16075..16950
DNA (876bp) protein (292aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
(protein release factor)-glutamine N5-methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=uncultured bacterium RepID=K1YYG1_9BACT
ar4r2_scaffold_731_18
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16966..18234
DNA (1269bp) protein (423aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7) rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PBP1_DESSD rbh
ar4r2_scaffold_731_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18424..19617)
DNA (1194bp) protein (398aa)
Polysulfide reductase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJ32_DESSD rbh
polysulfide reductase rbh
Polysulfide reductase {ECO:0000313|EMBL:AGF79549.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_731_20
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19704..20399)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7V4_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF79548.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_731_21
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20608..21375)
DNA (768bp) protein (256aa)
Fe-S-cluster-containing hydrogenase subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PD67_DESSD rbh
Fe-S-cluster-containing hydrogenase subunit rbh
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:AGF79547.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_731_22
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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21899..23116
DNA (1218bp) protein (406aa)
Putative low-complexity protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PT98_DESSD
putative low-complexity protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
ar4r2_scaffold_731_23
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23207..23779)
DNA (573bp) protein (191aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PIZ8_DESSD
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator {ECO:0000313|EMBL:AGF79545.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_731_24
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23790..24629)
DNA (840bp) protein (280aa)
Methylase of chemotaxis methyl-accepting protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJ29_DESSD rbh
methylase of chemotaxis methyl-accepting protein rbh
Methylase of chemotaxis methyl-accepting protein {ECO:0000313|EMBL:AGF79544.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_731_25
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24684..25823)
DNA (1140bp) protein (380aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7U9_DESSD rbh
CheY-like receiver and methylesterase domain-containing chemotaxis response regulator rbh
ar4r2_scaffold_731_26
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25823..26287)
DNA (465bp) protein (155aa)
Related to purine-binding chemotaxis protein CheW n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJV4_DESPS
purine-binding chemotaxis protein CheW
Related to purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CAG37372.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
ar4r2_scaffold_731_27
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26301..27053)
DNA (753bp) protein (251aa)
Chemotaxis protein histidine kinase-like protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PT94_DESSD rbh
chemotaxis protein histidine kinase-like protein rbh
Chemotaxis protein histidine kinase-like protein {ECO:0000313|EMBL:AGF79541.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Displaying 28 items

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