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ar4r2_scaffold_2143

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2143_1
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54..524)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J1D0_9DELT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
hypothetical protein
ar4r2_scaffold_2143_2
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1018..1851)
DNA (834bp) protein (278aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11) rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PUL5_DESSD rbh
ar4r2_scaffold_2143_3
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1855..2922)
DNA (1068bp) protein (356aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PEP3_DESSD rbh
Holliday junction DNA helicase subunit RuvB rbh
ar4r2_scaffold_2143_4
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2919..3554)
DNA (636bp) protein (212aa)
Holliday junction ATP-dependent DNA helicase RuvA id=1829529 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Holliday junction DNA helicase subunit RuvA
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_2143_5
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3589..4056)
DNA (468bp) protein (156aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IE37_9DELT
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_2143_6
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4109..4858)
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein DP2908 id=1829565 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
DNA-binding regulatory protein, YebC/PmpR family rbh
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_2143_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4923..5588)
DNA (666bp) protein (222aa)
23S rRNA methylase (EC:2.1.1.166)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PUL9_DESSD
ar4r2_scaffold_2143_8
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5898..6671)
DNA (774bp) protein (258aa)
precorrin-3 methyltransferase (EC:2.1.1.131) rbh
Precorrin-3 methyltransferase {ECO:0000313|EMBL:ADW19151.1}; EC=2.1.1.131 {ECO:0000313|EMBL:ADW19151.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
Precorrin-3 methyltransferase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REQ8_DESPD rbh
ar4r2_scaffold_2143_9
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6820..7791)
DNA (972bp) protein (324aa)
Cobalamin (Vitamin B12) biosynthesis CbiG protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REQ9_DESPD rbh
cobalamin (vitamin B12) biosynthesis protein CbiG rbh
Cobalamin (Vitamin B12) biosynthesis CbiG protein {ECO:0000313|EMBL:ADW19152.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_2143_10
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7800..8591)
DNA (792bp) protein (264aa)
precorrin-4 C(11)-methyltransferase (EC:2.1.1.133) rbh
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:ADW19153.1}; EC=2.1.1.133 {ECO:0000313|EMBL:ADW19153.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
Precorrin-4 C11-methyltransferase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER0_DESPD rbh
ar4r2_scaffold_2143_11
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8588..9340)
DNA (753bp) protein (251aa)
Precorrin-2 C20-methyltransferase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER1_DESPD
precorrin-2 C(20)-methyltransferase
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:ADW19154.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_2143_12
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9337..10542)
DNA (1206bp) protein (402aa)
precorrin-6y C5,15-methyltransferase subunit CbiE (EC:2.1.1.132) rbh
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:ADW19155.1}; EC=2.1.1.132 {ECO:0000313|EMBL:ADW19155.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER2_DESPD rbh
ar4r2_scaffold_2143_13
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10535..11614)
DNA (1080bp) protein (360aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER3_DESPD rbh
cobalamin biosynthesis protein CbiD rbh
ar4r2_scaffold_2143_14
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11640..12272)
DNA (633bp) protein (211aa)
precorrin-8X methylmutase (EC:5.4.1.2)
Precorrin-8X methylmutase {ECO:0000313|EMBL:ADW19157.1}; EC=5.4.99.61 {ECO:0000313|EMBL:ADW19157.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
Precorrin-8X methylmutase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER4_DESPD
ar4r2_scaffold_2143_15
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12552..13463)
DNA (912bp) protein (304aa)
Periplasmic binding protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER6_DESPD rbh
periplasmic-binding protein rbh
Periplasmic binding protein {ECO:0000313|EMBL:ADW19159.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_2143_16
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13460..14266)
DNA (807bp) protein (269aa)
ABC transporter related protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER7_DESPD
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADW19160.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_2143_17
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14250..15293)
DNA (1044bp) protein (348aa)
Transport system permease protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER8_DESPD rbh
transport system permease rbh
Transport system permease protein {ECO:0000313|EMBL:ADW19161.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_2143_18
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15306..16310)
DNA (1005bp) protein (335aa)
Anaerobic cobalt chelatase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER9_DESPD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJR98732.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
anaerobic cobalt chelatase rbh
ar4r2_scaffold_2143_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17295..18824)
DNA (1530bp) protein (510aa)
Putative domain HDIG-containing protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PEP8_DESSD rbh
putative domain HDIG-containing protein rbh
Putative domain HDIG-containing protein {ECO:0000313|EMBL:AGF80017.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_2143_20
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18895..19482
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P9A2_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF80018.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Displaying 20 items

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