ggKbase home page

ar4r2_scaffold_1192

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1192_1
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6A15B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG37287.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
ar4r2_scaffold_1192_2
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(270..821)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Ralstonia solanacearum RepID=B5SJP5_RALSL
Uncharacterized protein {ECO:0000313|EMBL:EAP72161.1}; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum UW551.;"
hypothetical protein
ar4r2_scaffold_1192_3

Not on your lists

comp(818..2071)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZND2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD39154.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_1192_4
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2035..3267)
DNA (1233bp) protein (411aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P6P8_AROAE rbh
ATPase rbh
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CAI07013.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
ar4r2_scaffold_1192_5
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3497..5017)
DNA (1521bp) protein (507aa)
Cytochrome c-552 {ECO:0000256|HAMAP-Rule:MF_01182, ECO:0000256|SAAS:SAAS00233541}; EC=1.7.2.2 {ECO:0000256|HAMAP-Rule:MF_01182};; Ammonia-forming cytochrome c nitrite reductase {ECO:0000256|HAMAP-Rule:MF_01182}; Flags: Precursor;; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
nrfA; cytochrome c552 (EC:1.7.2.2) rbh
Cytochrome c-552 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=NRFA_DESPS rbh
ar4r2_scaffold_1192_6
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5034..5564)
DNA (531bp) protein (177aa)
Probable small subunit of cytochrome c nitrite reductase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ARF2_DESPS
small subunit of cytochrome c nitrite reductase
Probable small subunit of cytochrome c nitrite reductase {ECO:0000313|EMBL:CAG35072.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
ar4r2_scaffold_1192_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6487..6864
DNA (378bp) protein (126aa)
Class III cytochrome C family protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PGS2_DESSD
class III cytochrome C family protein
Class III cytochrome C family protein {ECO:0000313|EMBL:AGF78835.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1192_8
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6875..9262
DNA (2388bp) protein (796aa)
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PR19_DESSD rbh
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:AGF78836.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
anaerobic dehydrogenase, typically selenocysteine-containing rbh
ar4r2_scaffold_1192_9
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9515..9814
DNA (300bp) protein (100aa)
Uncharacterized protein involved in formation of periplasmic nitrate reductase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PB12_DESSD
uncharacterized protein involved in formation of periplasmic nitrate reductase
Uncharacterized protein involved in formation of periplasmic nitrate reductase {ECO:0000313|EMBL:AGF78837.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1192_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10170..10766
DNA (597bp) protein (199aa)
4Fe-4S protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5R7_DESSD rbh
4Fe-4S protein rbh
4Fe-4S protein {ECO:0000313|EMBL:AGF78838.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1192_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10760..11620
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NGT4_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF78839.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1192_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11638..13194
DNA (1557bp) protein (519aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Signal transduction histidine kinase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5Q4_DESSD rbh
signal transduction histidine kinase rbh
ar4r2_scaffold_1192_13
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13409..14743
DNA (1335bp) protein (445aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PB01_DESSD rbh
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator rbh
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator {ECO:0000313|EMBL:AGF78827.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1192_14
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14776..15858)
DNA (1083bp) protein (361aa)
3-dehydroquinate synthase (EC:4.2.3.4) rbh
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
3-dehydroquinate synthase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PGR0_DESSD rbh
ar4r2_scaffold_1192_15
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15974..17254)
DNA (1281bp) protein (427aa)
sulfate adenylyltransferase (EC:2.7.7.4) rbh
Sulfate adenylyltransferase {ECO:0000313|EMBL:AGF78824.1}; EC=2.7.7.4 {ECO:0000313|EMBL:AGF78824.1};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Sulfate adenylyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NGR6_DESSD rbh
ar4r2_scaffold_1192_16
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17604..20099)
DNA (2496bp) protein (832aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5P8_DESSD rbh
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:EMG35767.1}; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
heavy metal translocating P-type ATPase rbh
ar4r2_scaffold_1192_17
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20239..22104
DNA (1866bp) protein (622aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Signal peptide peptidase A n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5X9_DESSD rbh
signal peptide peptidase A rbh
ar4r2_scaffold_1192_18
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22139..23110
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PR68_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF78876.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1192_19
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23177..23725
DNA (549bp) protein (183aa)
Phosphatidylglycerophosphate synthase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJU4_DESSD
phosphatidylglycerophosphate synthase
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:AGF79825.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_1192_20
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23788..25194
DNA (1407bp) protein (469aa)
Metallophosphoesterase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z208_DESAF rbh
metallophosphoesterase rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
ar4r2_scaffold_1192_21
unknown

Not on your lists

25268..25384
DNA (117bp) protein (39aa)

This feature has no annotations

ar4r2_scaffold_1192_22
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25537..25722
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJX5_DESPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG37351.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
ar4r2_scaffold_1192_23
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

26176..27516
DNA (1341bp) protein (447aa)
Glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4) rbh
Glutamate dehydrogenase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5V7_DESAT rbh
Tax=RBG_13_WOR_2_41_10_curated
ar4r2_scaffold_1192_24
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27768..28910
DNA (1143bp) protein (381aa)
glutamate synthase (NADPH) GltB1 subunit (EC:1.4.1.13) rbh
Glutamate synthase (NADPH) GltB1 subunit {ECO:0000313|EMBL:AGF76619.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AGF76619.1};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Glutamate synthase (NADPH) GltB1 subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1N9T4_DESSD rbh
ar4r2_scaffold_1192_25
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28868..30508
DNA (1641bp) protein (547aa)
Glutamate synthase family protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P9Z8_DESSD rbh
Glutamate synthase family protein {ECO:0000313|EMBL:AGF76620.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
glutamate synthase family protein rbh
ar4r2_scaffold_1192_26
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30668..31009
DNA (342bp) protein (114aa)
Related to glutamate synthase, beta subunit id=1800393 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
NADPH-dependent glutamate synthase beta chain-like oxidoreductase
NADPH-dependent glutamate synthase beta chain-like oxidoreductase {ECO:0000313|EMBL:AGF76621.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Displaying 26 items

View Taxonomy