ggKbase home page

ar4r2_scaffold_3890

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3890_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) PF23_DESSD">RepID=M1PF23_DESSD
prolipoprotein diacylglyceryl transferase
ar4r2_scaffold_3890_2
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240..2240)
DNA (2001bp) protein (667aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PPE7_DESSD rbh
glucose-inhibited division protein A rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_3890_3
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2245..3093)
DNA (849bp) protein (283aa)
Dimethyladenosine transferase (RRNA methylation) n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NF45_DESSD rbh
dimethyladenosine transferase (rRNA methylation) rbh
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_3890_4
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3644..3781
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3I1P9_9RHIZ
LSU ribosomal protein L34p
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elongatum DSM 19469.;"
ar4r2_scaffold_3890_5
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3729..4124
DNA (396bp) protein (132aa)
Ribonuclease P protein component {ECO:0000255|HAMAP-Rule:MF_00227}; Short=RNase P protein {ECO:0000255|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000255|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000255|HAMAP-Rule:MF_00227};; Protein C5 {ECO:0000255|HAMAP-Rule:MF_00227}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
Ribonuclease P protein component n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RNPA_DESPS
ribonuclease P, protein component
ar4r2_scaffold_3890_6
Cylindrospermopsis raciborskii, Cylindrospermopsis, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4109..4372
DNA (264bp) protein (88aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZKZ6_NODSP
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=533240 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermopsis.;" source="Cylindrospermopsis raciborskii CS-505.;"
ar4r2_scaffold_3890_7
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4482..6164
DNA (1683bp) protein (561aa)
Membrane protein insertase YidC n=1 Tax=uncultured bacterium RepID=K1YX33_9BACT rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
protein translocase subunit yidC rbh
ar4r2_scaffold_3890_8
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6284..7297
DNA (1014bp) protein (338aa)
Putative uncharacterized protein id=1753269 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good rbh
putative RNA-binding protein
Tax=GWB2_Desulfobacterales_56_26_curated
ar4r2_scaffold_3890_9
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7327..8730
DNA (1404bp) protein (468aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
tRNA modification GTPase MnmE n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NF50_DESSD rbh
tRNA modification GTPase trmE rbh
ar4r2_scaffold_3890_10
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8806..9579)
DNA (774bp) protein (258aa)
Uncharacterized protein id=3671007 bin=GWF2_Geobacter_54_21 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
OB-fold tRNA/helicase-type nucleic acid binding protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
ar4r2_scaffold_3890_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9615..10457)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NG91_DESSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF78674.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
ar4r2_scaffold_3890_12
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10696..11736)
DNA (1041bp) protein (347aa)
Di-heme cytochrome c peroxidase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHN2_DESPD rbh
Di-heme cytochrome c peroxidase rbh
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:ADW17369.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
ar4r2_scaffold_3890_13
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11886..12200)
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=4217757 bin=GWC2_Geobacteraceae_55_20 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
ar4r2_scaffold_3890_14
unknown

Not on your lists

comp(12612..12758)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 14 items

View Taxonomy