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ar4r2_scaffold_3184

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3184_1
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..365
DNA (363bp) protein (121aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823}; Short=ACCase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000255|HAMAP-Rule:MF_00823};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=ACCA_THICR
ar4r2_scaffold_3184_2
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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375..1673
DNA (1299bp) protein (433aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XIX6_METNJ
tRNA(Ile)-lysidine synthetase
ar4r2_scaffold_3184_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1693..2643)
DNA (951bp) protein (317aa)
Transcriptional regulator, LysR family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FC6_THICR rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABB42147.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_3184_4
Xenorhabdus doucetiae, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2761..3144)
DNA (384bp) protein (128aa)
glycine cleavage system protein H n=1 Tax=Yersinia enterocolitica RepID=UPI0002DCE096
gcvH; Glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272, ECO:0000313|EMBL:CDG18672.1}; TaxID=351671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus doucetiae.;"
ar4r2_scaffold_3184_5
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3128..4036)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036CD703
Uncharacterized protein {ECO:0000313|EMBL:KDN96918.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Ion transport protein
ar4r2_scaffold_3184_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4033..5241)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00035C32D8 rbh
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_3184_7
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5244..6425)
DNA (1182bp) protein (394aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D867_9GAMM
ubiquinone biosynthesis protein UbiH
Ubiquinone biosynthesis protein UbiH {ECO:0000313|EMBL:AHF00896.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_3184_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6407..7717)
DNA (1311bp) protein (437aa)
Aminopeptidase P. Metallo peptidase. MEROPS family M24B {ECO:0000313|EMBL:ABB42151.1}; EC=3.4.11.9 {ECO:0000313|EMBL:ABB42151.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003761132 rbh
peptidase M24 rbh
ar4r2_scaffold_3184_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7747..8286)
DNA (540bp) protein (180aa)
UPF0149 protein PPUTLS46_017979 n=2 Tax=Pseudomonas putida RepID=M7QYQ4_PSEPU
hypothetical protein
UPF0149 protein C206_11689 {ECO:0000256|HAMAP-Rule:MF_00346}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
Displaying 9 items

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