ggKbase home page

ar4r2_scaffold_747

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_747_1
unknown

Not on your lists

394..912
DNA (519bp) protein (173aa)

This feature has no annotations

ar4r2_scaffold_747_2
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(953..1897)
DNA (945bp) protein (315aa)
Uncharacterized conserved protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LL37_CHLTF
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:AEP13713.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
ar4r2_scaffold_747_3
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1973..3022)
DNA (1050bp) protein (350aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
Pseudaminic acid synthase n=3 Tax=Pseudomonas aeruginosa RepID=U8P6W0_PSEAI rbh
N-acetylneuraminate synthase {ECO:0000313|EMBL:AKE52349.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
ar4r2_scaffold_747_4
Vibrio harveyi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3015..3764)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Vibrio vulnificus RepID=UPI000364B0C6
Strain BSW5 contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP78112.1}; TaxID=669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio harveyi (Beneckea harveyi).;"
ar4r2_scaffold_747_5
Vibrio harveyi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3757..5967)
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Vibrio halioticoli NBRC 102217 RepID=V5FDT2_9VIBR rbh
Strain BSW5 contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP77983.1}; TaxID=669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio harveyi (Beneckea harveyi).;"
FkbH-like protein
ar4r2_scaffold_747_6
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5983..6858)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000369B136
Uncharacterized protein {ECO:0000313|EMBL:KIF39088.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
type 11 methyltransferase
ar4r2_scaffold_747_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6874..7617)
DNA (744bp) protein (248aa)
dTDP-6-deoxy-L-hexose 3-O-methyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JX81_9PROT rbh
dTDP-6-deoxy-L-hexose 3-O-methyltransferase {ECO:0000313|EMBL:EKE69855.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
dTDP-6-deoxy-L-hexose 3-O-methyltransferase rbh
ar4r2_scaffold_747_8
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7629..8708)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003657B1A rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AKE52351.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
polysaccharide biosynthesis protein
ar4r2_scaffold_747_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8713..9771)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTS2_9CHLB rbh
hypothetical protein
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_747_10
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9811..11376)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZK6_AROAE rbh
Hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
ar4r2_scaffold_747_11
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11373..12926)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YX67_9RHOO rbh
Hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
ar4r2_scaffold_747_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12952..13659)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036C3A0F
NeuA
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_747_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13656..14612)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000375F2D5
hypothetical protein
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_747_14
Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14612..15772)
DNA (1161bp) protein (387aa)
Spore coat protein n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DCA2_9PSED rbh
Putative aminotransferase {ECO:0000313|EMBL:CEP34580.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5.;"
spore coat protein
ar4r2_scaffold_747_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15769..16770)
DNA (1002bp) protein (334aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDF0_RALP1 rbh
polysaccharide biosynthesis protein CapD rbh
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ACS61885.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
ar4r2_scaffold_747_16
Cedecea davisae, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16772..17941)
DNA (1170bp) protein (390aa)
Membrane-bound lytic murein transglycosylase C {ECO:0000256|HAMAP-Rule:MF_01616, ECO:0000256|SAAS:SAAS00008923}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_01616, ECO:0000256|SAAS:SAAS00008932};; Murein lyase C {ECO:0000256|HAMAP-Rule:MF_01616}; Flags: Precursor;; TaxID=566551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea davisae DSM 4568.;"
Membrane-bound lytic murein transglycosylase C n=1 Tax=Cedecea davisae DSM 4568 RepID=S3IMS6_9ENTR
lytic transglycosylase
ar4r2_scaffold_747_17
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17962..19248)
DNA (1287bp) protein (429aa)
Flagellar hook-associated protein FlgL n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YKM7_METFJ
flagellar hook-associated protein FlgL
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:AFJ03470.1}; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
ar4r2_scaffold_747_18
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19260..21350)
DNA (2091bp) protein (697aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037177FD rbh
Putative Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CDH47149.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
flagellar hook-associated protein 1 FlgK
ar4r2_scaffold_747_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21371..21931)
DNA (561bp) protein (187aa)
Flagellar protein FlgJ-like protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBL9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02333.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_747_20
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21942..23033)
DNA (1092bp) protein (364aa)
Flagellar P-ring protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=FLGI_THICR rbh
flgI; flagellar basal body P-ring biosynthesis protein FlgA rbh
Flagellar P-ring protein {ECO:0000255|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000255|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_747_21
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23328..24011)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037FD800
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
flagellar L-ring protein
ar4r2_scaffold_747_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24033..24818)
DNA (786bp) protein (262aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBM2_9GAMM
flgG; flagellar basal body rod protein FlgG
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:AHF01602.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_747_23
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24848..25591)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000381EA77
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:KDN95438.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
ar4r2_scaffold_747_24
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25767..26144)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000361857B
hypothetical protein
Flagellar hook protein FlgE {ECO:0000313|EMBL:ABB42063.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Displaying 24 items

View Taxonomy