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ar4r2_scaffold_2209

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2209_1
Wohlfahrtiimonas chitiniclastica, Wohlfahrtiimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(56..223)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Wohlfahrtiimonas chitiniclastica SH04 RepID=L8XYV4_9GAMM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1261130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Wohlfahrtiimonas.;" source="Wohlfahrtiimonas chitiniclastica SH04.;"
rpmG; 50S ribosomal subunit protein L33
ar4r2_scaffold_2209_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(235..471)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Thiothrix flexilis RepID=UPI000372D0A7
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri TS44.;"
ar4r2_scaffold_2209_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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671..4192
DNA (3522bp) protein (1174aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XIX3_METNJ
ar4r2_scaffold_2209_4
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4263..5189)
DNA (927bp) protein (309aa)
Cadmium, cobalt and zinc/H(+)-K(+) antiporter n=1 Tax=Halomonas sp. A3H3 RepID=T2LGG8_9GAMM rbh
Cadmium, cobalt and zinc/H(+)-K(+) antiporter {ECO:0000313|EMBL:CDG56123.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.;"
cation diffusion facilitator family transporter
ar4r2_scaffold_2209_5
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5704..6441
DNA (738bp) protein (246aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Thiomicrospira arctica RepID=UPI00037D2A9D
ar4r2_scaffold_2209_6
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6553..7296
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037B1064
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KDN95523.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Crp/Fnr family transcriptional regulator
ar4r2_scaffold_2209_7
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7469..8110)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036F6421
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABB41977.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_2209_8
Vibrio fluvialis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8107..9585)
DNA (1479bp) protein (493aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1336752 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio fluvialis PG41.;"
Sensor protein torS n=1 Tax=Vibrio fluvialis I21563 RepID=S7HZS7_VIBFL
histidine kinase
ar4r2_scaffold_2209_9
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9885..10715)
DNA (831bp) protein (277aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8N0_THICA
ar4r2_scaffold_2209_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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10799..11170
DNA (372bp) protein (124aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AH84_9PROT
lactoylglutathione lyase-like lyase
Glyoxalase {ECO:0000313|EMBL:GAO35697.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ar4r2_scaffold_2209_11
unknown

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11470..11733
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 11 items

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