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ar4r2_scaffold_2059

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2059_1
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..504
DNA (504bp) protein (168aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003639689
beta-hexosaminidase
ar4r2_scaffold_2059_2
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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501..2111
DNA (1611bp) protein (537aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Exodeoxyribonuclease VII, large subunit n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCH9_THICA rbh
exodeoxyribonuclease VII large subunit rbh
ar4r2_scaffold_2059_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2115..2339
DNA (225bp) protein (75aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GC0_THICR
hypothetical protein
ar4r2_scaffold_2059_4
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2344..3894
DNA (1551bp) protein (517aa)
Methyltransferase regulatory domain-containing protein n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E1K3_9GAMM
Methyltransferase regulatory domain-containing protein {ECO:0000313|EMBL:EGZ50723.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
hypothetical protein
ar4r2_scaffold_2059_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4019..6682
DNA (2664bp) protein (888aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAD8_9GAMM rbh
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AHF02070.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_2059_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6702..7784)
DNA (1083bp) protein (361aa)
Glycine cleavage system T protein homolog n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HQ0_THICR
glycine cleavage T protein (aminomethyl transferase)
Glycine cleavage system T protein homolog {ECO:0000313|EMBL:ABB41323.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_2059_7
unknown

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comp(7781..7915)
DNA (135bp) protein (45aa)

This feature has no annotations

ar4r2_scaffold_2059_8
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8010..9056
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037E2EEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02246.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_2059_9
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9062..9718)
DNA (657bp) protein (219aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P1I1_VIBME
ar4r2_scaffold_2059_10
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9719..11383)
DNA (1665bp) protein (555aa)
ABC transporter related protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7D3_9GAMM rbh
heme ABC transporter ATP-binding protein
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF01013.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_2059_11
Shewanella denitrificans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11627..12352)
DNA (726bp) protein (242aa)
Integrase, catalytic region n=1 Tax=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) RepID=Q12NX0_SHEDO
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABE54426.1}; TaxID=318161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).;"
ar4r2_scaffold_2059_12
Shewanella denitrificans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12478..12798)
DNA (321bp) protein (107aa)
Putative glycine betaine/choline/proline transport system permease protein n=1 Tax=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) RepID=Q12IG1_SHEDO
glycine betaine/choline/proline transport system permease protein
Putative glycine betaine/choline/proline transport system permease protein {ECO:0000313|EMBL:ABE56765.1}; TaxID=318161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).;"
ar4r2_scaffold_2059_13
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13013..14461)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Cronobacter sakazakii 680 RepID=K8DJM6_CROSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKE93353.1}; TaxID=28141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii (Enterobacter sakazakii).;"
ar4r2_scaffold_2059_14

Not on your lists

comp(14480..14917)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Francisella novicida FTG RepID=E2MT81_FRANO
Uncharacterized protein {ECO:0000313|EMBL:EKD98646.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ar4r2_scaffold_2059_15
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14949..15800)
DNA (852bp) protein (284aa)
UPI0003D66F77 related cluster n=1 Tax=unknown RepID=UPI0003D66F77
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH00728.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
ar4r2_scaffold_2059_16
unknown

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comp(15793..17082)
DNA (1290bp) protein (430aa)

This feature has no annotations

ar4r2_scaffold_2059_17
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17092..18708)
DNA (1617bp) protein (539aa)
OmpA protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002886C5A
OmpA protein
OmpA {ECO:0000313|EMBL:AAZ59405.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
ar4r2_scaffold_2059_18
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18936..20603
DNA (1668bp) protein (556aa)
gamma-glutamyltransferase (EC:2.3.2.2) rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:AEG31070.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AEG31070.1};; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Gamma-glutamyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAA4_THICA rbh
ar4r2_scaffold_2059_19
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20593..21603)
DNA (1011bp) protein (337aa)
glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal (EC:1.1.3.15) rbh
Glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal {ECO:0000313|EMBL:CAD86037.1}; EC=1.1.3.15 {ECO:0000313|EMBL:CAD86037.1};; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
hypothetical protein n=1 Tax=Methylophilus RepID=UPI00036C1782 rbh
ar4r2_scaffold_2059_20
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21672..21905
DNA (234bp) protein (78aa)
SpoVT/AbrB domain protein n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3ENF3_CHLPB
Virulence-associated protein {ECO:0000313|EMBL:EZP50090.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SpoVT/AbrB domain-containing protein
ar4r2_scaffold_2059_21
Acinetobacter guillouiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21902..22312
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Acinetobacter guillouiae RepID=N8S219_ACIGI
Uncharacterized protein {ECO:0000313|EMBL:ENU57246.1}; TaxID=1217655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter guillouiae CIP 63.46.;"
PilT protein domain-containing protein
ar4r2_scaffold_2059_22
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22319..23002)
DNA (684bp) protein (228aa)
PKHD-type hydroxylase JU82_11340 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1537917 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
PKHD-type hydroxylase B649_07830 n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S575_9HELI rbh
hypothetical protein rbh
ar4r2_scaffold_2059_23
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23118..23981)
DNA (864bp) protein (288aa)
Putative TonB-dependent receptor n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K319_AZOSB rbh
putative TonB-dependent receptor rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:CAL93224.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Displaying 23 items

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