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ar4r2_scaffold_2437

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2437_1
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..389
DNA (387bp) protein (129aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Methylomicrobium album BG8 RepID=H8GNV8_METAL
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EIC28380.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
oligopeptide ABC transporter permease
ar4r2_scaffold_2437_2
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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389..1711
DNA (1323bp) protein (441aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Marichromatium purpuratum 984 RepID=F9U3R5_MARPU rbh
peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:AHF03029.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
ar4r2_scaffold_2437_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1721..3328
DNA (1608bp) protein (536aa)
Nickel-transporting ATPase (EC:3.6.3.24 3.6.3.30)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000363BE63 rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_2437_4
Shewanella putrefaciens, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3399..4997)
DNA (1599bp) protein (533aa)
MLTD_N domain protein n=2 Tax=Shewanella RepID=A1RK79_SHESW rbh
MltD domain-containing protein rbh
MLTD_N domain protein {ECO:0000313|EMBL:ABP75500.1}; TaxID=319224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella putrefaciens (strain CN-32 / ATCC BAA-453).;"
ar4r2_scaffold_2437_5
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4994..5818)
DNA (825bp) protein (275aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U8H7_9BURK
ar4r2_scaffold_2437_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5882..6595
DNA (714bp) protein (238aa)
UPI0003D3F1EC related cluster n=1 Tax=unknown RepID=UPI0003D3F1EC
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD23988.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
methylase
ar4r2_scaffold_2437_7
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6627..7061
DNA (435bp) protein (145aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ08_NEPCE
ar4r2_scaffold_2437_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7046..7777)
DNA (732bp) protein (244aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ABB41526.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABB41526.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
DNA polymerase III, epsilon subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31H47_THICR
ar4r2_scaffold_2437_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7992..8444
DNA (453bp) protein (151aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYE1_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase
Tax=RBG_16_Gamma2_65_34_curated
ar4r2_scaffold_2437_10
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8521..9918
DNA (1398bp) protein (466aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000362C47B rbh
ar4r2_scaffold_2437_11
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10022..10543)
DNA (522bp) protein (174aa)
Sulfate permease (SulP) family transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FE8_THICR
Sulfate permease {ECO:0000313|EMBL:KDN95587.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
sulfate transporter
Displaying 11 items

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