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Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
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CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..346
DNA (345bp) protein (115aa)
acriflavin resistance protein id=12496502 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Acriflavin resistance protein
Tax=CG_Hydro_01
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Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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459..887
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8R9_9GAMM
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
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Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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901..1293
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RS9_THICR
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
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marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1361..2740)
DNA (1380bp) protein (460aa)
Two component transcriptional regulator, winged helix family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5Z4_9GAMM
Two component transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:EAW40754.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
Two-component transcriptional regulator, winged helix family
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unknown

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comp(3208..3450)
DNA (243bp) protein (81aa)

This feature has no annotations

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Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3463..3705)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KQ58_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG19129.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
GTP-binding protein
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Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3769..8406)
DNA (4638bp) protein (1546aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
PAS domain S-box n=1 Tax=Pseudomonas sp. GM74 RepID=J2UNU4_9PSED rbh
PAS domain-containing protein rbh
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Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8399..9433)
DNA (1035bp) protein (345aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=3 Tax=Shewanella baltica RepID=A9L2G6_SHEB9 rbh
response regulator receiver modulated metal dependent phosphohydrolase rbh
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ABX48048.1}; TaxID=399599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (strain OS195).;"
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Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9640..10932)
DNA (1293bp) protein (431aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13) rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX32_HALNC rbh
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Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10953..11573)
DNA (621bp) protein (207aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11 1.8.4.12) rbh
Peptide methionine sulfoxide reductase msrA {ECO:0000313|EMBL:EGV17138.1}; EC=1.8.4.11 {ECO:0000313|EMBL:EGV17138.1};; EC=1.8.4.12 {ECO:0000313|EMBL:EGV17138.1};; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
Peptide methionine sulfoxide reductase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWW6_HALNC rbh
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Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11725..13305)
DNA (1581bp) protein (527aa)
IMP cyclohydrolase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B61630 rbh
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
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CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13298..13579)
DNA (282bp) protein (94aa)
Transcriptional regulator, Fis family n=3 Tax=root RepID=B5ELA9_ACIF5
Fis family transcriptional regulator
Tax=CG_Thiomicrospira_01
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Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13682..14035
DNA (354bp) protein (118aa)
Ferredoxin n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I82_THICR
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABB41141.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
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Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14102..14371)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003616CE8
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida.;"
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Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14574..15347
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JA3_THICR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB40770.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
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unknown

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15352..15912
DNA (561bp) protein (187aa)

This feature has no annotations

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Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15899..16645
DNA (747bp) protein (249aa)
PP-loop family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J95_THICR rbh
PP-loop protein rbh
PP-loop family protein {ECO:0000313|EMBL:ABB40778.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
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Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16642..17532
DNA (891bp) protein (297aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J94_THICR
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ABB40779.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
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Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17562..18188
DNA (627bp) protein (209aa)
Tellurite resistance protein TehB, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IW35_RHOCS
tehB; tellurite resistance protein TehB
Tellurite resistance protein TehB, putative {ECO:0000313|EMBL:ACJ00509.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
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Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18185..18772
DNA (588bp) protein (196aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DDCE03
gmhA; sugar isomerase (sis)
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Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18860..19771
DNA (912bp) protein (304aa)
Signaling protein (CHEY,EAL,GGDEF domains) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQA3_NEPCE
Signaling protein (CHEY,EAL,GGDEF domains) {ECO:0000313|EMBL:EAR62628.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
putative signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
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Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19802..21403
DNA (1602bp) protein (534aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
ATP-binding region, ATPase-like protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21L07_SACD2
ATP-binding region, ATPase-like protein
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Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21400..22581
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halomonas sp. A3H3 RepID=T2LFV5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CEP36564.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5.;"
hypothetical protein
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unknown

Not on your lists

22583..23074
DNA (492bp) protein (164aa)

This feature has no annotations

ar4r2_scaffold_728_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23102..24070)
DNA (969bp) protein (323aa)
Polyprenyl synthetase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8T3_9GAMM
octaprenyl diphosphate synthase
Tax=CG_Thiomicrospira_01
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Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24131..24754)
DNA (624bp) protein (208aa)
Phosphomethylpyrimidine kinase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDH9_9GAMM
conserved hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43150.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
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unknown

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comp(24764..25576)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003604F78
hypothetical protein
ar4r2_scaffold_728_28
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25680..26567
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000373C0C1
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
rlmL; ribosomal RNA large subunit methyltransferase L
Displaying 28 items

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