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ar4r2_scaffold_1256

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1256_1
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(54..191)
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=RL34_TOLAT
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
ar4r2_scaffold_1256_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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282..1043
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L113_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96386.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1256_3
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1294..2673
DNA (1380bp) protein (460aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DB37_THICA rbh
chromosome replication initiator DnaA rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
ar4r2_scaffold_1256_4
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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2738..3850
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JT31_9GAMM rbh
ar4r2_scaffold_1256_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3859..4944
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA75_9GAMM
DNA repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_1256_6
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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5007..6407
DNA (1401bp) protein (467aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;" source="Bermanella marisrubri.;"
argininosuccinate lyase (EC:4.3.2.1) rbh
Argininosuccinate lyase n=1 Tax=Bermanella marisrubri RepID=Q1N444_9GAMM rbh
ar4r2_scaffold_1256_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6482..8722)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9K5_9PROT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAN34270.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
ar4r2_scaffold_1256_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8775..9851)
DNA (1077bp) protein (359aa)
Glycosyl transferase group 1 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZ16_9GAMM
Glycosyl transferase group 1 {ECO:0000313|EMBL:EIJ36609.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
O-antigen biosynthesis glycosyltranferase
ar4r2_scaffold_1256_9
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9848..12547)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39XV7_GEOMG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB30917.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
ar4r2_scaffold_1256_10
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12537..12833)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SU83_9DELT
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
ar4r2_scaffold_1256_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(12843..13091)
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=3668355 bin=GWF2_Lentisphaerae_50_93 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
ar4r2_scaffold_1256_12
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13095..14615)
DNA (1521bp) protein (507aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Thauera sp. 63 RepID=N6Y6C6_9RHOO rbh
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:ENO77623.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
DNA methylase family protein
ar4r2_scaffold_1256_13
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14621..15214)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI00018168C1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32843.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
ar4r2_scaffold_1256_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15214..16374)
DNA (1161bp) protein (387aa)
chromosome segregation protein SMC n=1 Tax=Ralstonia solanacearum RepID=UPI00018168C0 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM32842.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
ar4r2_scaffold_1256_15
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16395..18341)
DNA (1947bp) protein (649aa)
Asparagine synthetase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R720_9CYAN rbh
asparagine synthase rbh
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:AFY52857.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
ar4r2_scaffold_1256_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18451..20265
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000370FBBD
chemotaxis protein
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_1256_17
unknown

Not on your lists

20289..20708
DNA (420bp) protein (140aa)

This feature has no annotations

ar4r2_scaffold_1256_18
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20733..21203)
DNA (471bp) protein (157aa)
UPF0260 protein GB2207_02172 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTB5_9GAMM
UPF0260 protein GB2207_02172 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
hypothetical protein
ar4r2_scaffold_1256_19
Sulfurospirillum sp. SCADC, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

21300..21845
DNA (546bp) protein (182aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1537915 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum sp. SCADC.;"
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=halophilic archaeon DL31 RepID=G2MGR9_9ARCH
Displaying 19 items

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