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ar4r2_scaffold_805

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_805_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..196
DNA (195bp) protein (65aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.4.16)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8G9_THICA
ar4r2_scaffold_805_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295..774
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7E3_9GAMM
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_805_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

767..1900
DNA (1134bp) protein (378aa)
hydroxypyruvate reductase (EC:1.1.1.81)
MOFRL domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BS40_9GAMM
MOFRL domain protein {ECO:0000313|EMBL:EIJ34183.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_805_4
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1901..2725
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7E1_9GAMM rbh
anaerobic ribonucleoside triphosphate reductase
Anaerobic ribonucleoside triphosphate reductase {ECO:0000313|EMBL:AHF01006.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_805_5
unknown

Not on your lists

comp(2722..3039)
DNA (318bp) protein (106aa)

This feature has no annotations

ar4r2_scaffold_805_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3106..3393)
DNA (288bp) protein (96aa)
Sigma54 modulation protein/ribosomal protein S30EA n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYS6_HALNC
sigma54 modulation protein/30S ribosomal protein S30EA
Sigma54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ACX95599.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_805_7
Providencia rustigianii, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3555..4313)
DNA (759bp) protein (253aa)
ABC transporter, ATP-binding protein n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P1V6_9ENTR rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB72577.1}; TaxID=500637 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia rustigianii DSM 4541.;"
lptB; LPS export ABC transporter ATP-binding protein
ar4r2_scaffold_805_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4323..4919)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000380DD39
lipopolysaccharide transport periplasmic protein LptA
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_805_9
unknown

Not on your lists

comp(4882..5412)
DNA (531bp) protein (177aa)

This feature has no annotations

ar4r2_scaffold_805_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5429..5965)
DNA (537bp) protein (179aa)
phosphatase kdsC (EC:3.1.3.45)
Phosphatase kdsC n=2 Tax=Nitrosococcus oceani RepID=Q3J7G0_NITOC
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_805_11
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6199..6696
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U8Y7_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV19245.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
ar4r2_scaffold_805_12
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6696..7508
DNA (813bp) protein (271aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30) rbh
Fe(3+)-transporting ATPase n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A4X9_METMM rbh
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEF99142.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
ar4r2_scaffold_805_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7501..8277
DNA (777bp) protein (259aa)
ATP-binding cassette (ABC) superfamily transporter, permease component n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GZ8_THICR rbh
hypothetical protein rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_805_14
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8293..8763
DNA (471bp) protein (157aa)
Mammalian cell entry related domain protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBD6_THICA
mammalian cell entry domain-containing protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:AEG31244.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
ar4r2_scaffold_805_15
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8788..9399
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037A4B13
Toluene tolerance protein {ECO:0000313|EMBL:KDN95332.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
toluene tolerance protein
ar4r2_scaffold_805_16
unknown

Not on your lists

9389..9676
DNA (288bp) protein (96aa)

This feature has no annotations

ar4r2_scaffold_805_17
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..10599
DNA (927bp) protein (309aa)
Putative ABC transporter ATP-binding subunit protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EAD5_9GAMM rbh
Putative ABC transporter ATP-binding subunit protein {ECO:0000313|EMBL:ERJ20611.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
ABC transporter
ar4r2_scaffold_805_18
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10596..11363
DNA (768bp) protein (256aa)
ABC-2 type transporter n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBE0_THICA
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
ar4r2_scaffold_805_19
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11426..11659
DNA (234bp) protein (78aa)
BolA family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UBE9_9GAMM
BolA-like protein {ECO:0000313|EMBL:KFZ89212.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
BolA family protein
ar4r2_scaffold_805_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11659..12918
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiomicrospira halophila RepID=UPI000379B61A rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_805_21
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12934..13569
DNA (636bp) protein (212aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
ATP phosphoribosyltransferase n=1 Tax=Pseudomonas putida S610 RepID=V6JIP1_PSEPU
hisG; ATP phosphoribosyltransferase catalytic subunit
ar4r2_scaffold_805_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13572..14867
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
histidinol dehydrogenase n=1 Tax=Thiomicrospira arctica RepID=UPI0003714465 rbh
histidinol dehydrogenase
ar4r2_scaffold_805_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14871..15944
DNA (1074bp) protein (358aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9) rbh
Histidinol-phosphate aminotransferase 2 {ECO:0000255|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000255|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase 2 {ECO:0000255|HAMAP-Rule:MF_01023}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Histidinol-phosphate aminotransferase 2 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=HIS82_DECAR rbh
ar4r2_scaffold_805_24
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15949..16695
DNA (747bp) protein (249aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JAX8_BURVG
hypothetical protein
Tax=GWA2_Gallionellales_60_142_curated
ar4r2_scaffold_805_25
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16809..17396
DNA (588bp) protein (196aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GY7_THICR
ar4r2_scaffold_805_26
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17396..18640
DNA (1245bp) protein (415aa)
Cytochrome b n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GY6_THICR rbh
cytochrome b/b6-like protein rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_805_27
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18583..19308
DNA (726bp) protein (242aa)
Ubiquinol:cytochrome c oxidoreductase (Bc1 complex) cytochrome c1 subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GY5_THICR
cytochrome c1
Ubiquinol:cytochrome c oxidoreductase (Bc1 complex) cytochrome c1 subunit {ECO:0000313|EMBL:ABB41588.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_805_28
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19406..20011
DNA (606bp) protein (202aa)
Glutathione S-transferase domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCG7_9GAMM
sspA; stringent starvation protein A
Stringent starvation protein A {ECO:0000313|EMBL:AHF01886.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_805_29
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20013..20435
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0002EBB9DF
Strain MEJ086 contig_108, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89673.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
hypothetical protein
ar4r2_scaffold_805_30
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20445..21836
DNA (1392bp) protein (464aa)
DNA repair protein RadA n=1 Tax=Thiomicrospira halophila RepID=UPI00036FCDAD rbh
DNA repair protein RadA rbh
Tax=CG_Thiomicrospira_01
Displaying items 1-30 of 34 in total

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