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ar4r2_scaffold_2846

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2846_1
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..424
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7NR10_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS85697.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
integrase catalytic subunit
ar4r2_scaffold_2846_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(321..1214)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQN9_9GAMM
hypothetical protein
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_2846_3
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1398..2267
DNA (870bp) protein (290aa)
Putative cation efflux system protein (Cobalt-zinc-cadmium resistance CzcD-like), CDF family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RZN6_9BRAD
Cation transporter {ECO:0000313|EMBL:KGK42626.1}; TaxID=1545442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. A-D6.;"
CDF family cation efflux system protein
ar4r2_scaffold_2846_4
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2287..3207)
DNA (921bp) protein (307aa)
coproporphyrinogen-III oxidase, aerobic (EC:1.3.3.3) rbh
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBK7_THICA rbh
ar4r2_scaffold_2846_5
unknown

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comp(3215..3304)
DNA (90bp) protein (30aa)

This feature has no annotations

ar4r2_scaffold_2846_6
unknown

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comp(3285..3518)
DNA (234bp) protein (78aa)

This feature has no annotations

ar4r2_scaffold_2846_7
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3527..3841)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI00035C2C66
Uncharacterized protein {ECO:0000313|EMBL:AKH21938.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
ar4r2_scaffold_2846_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3854..4666)
DNA (813bp) protein (271aa)
UDP pyrophosphate phosphatase (EC:3.6.1.27) rbh
Undecaprenyl-diphosphatase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZL25_9RHOO rbh
Tax=CG_Hydro_01
ar4r2_scaffold_2846_9
unknown

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comp(4668..5426)
DNA (759bp) protein (253aa)

This feature has no annotations

ar4r2_scaffold_2846_10
unknown

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comp(5447..6181)
DNA (735bp) protein (245aa)

This feature has no annotations

ar4r2_scaffold_2846_11
Erwinia piriflorinigrans, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6178..6729)
DNA (552bp) protein (184aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1161919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia piriflorinigrans CFBP 5888.;"
Uncharacterized protein n=1 Tax=Erwinia piriflorinigrans CFBP 5888 RepID=V5ZBY9_9ENTR
yrdC; hypothetical protein
ar4r2_scaffold_2846_12
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6729..7670)
DNA (942bp) protein (314aa)
homoserine kinase (EC:2.7.1.39) rbh
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000371B811 rbh
ar4r2_scaffold_2846_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7787..9133)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036635B3 rbh
trmE; tRNA modification GTPase TrmE rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_2846_14
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9218..9637)
DNA (420bp) protein (140aa)
Membrane protein insertase YidC n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YD26_THIV6
protein translocase subunit yidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
Displaying 14 items

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