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ar4r2_scaffold_748_15

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: comp(11565..12305)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HN0_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 244.0
  • Bit_score: 327
  • Evalue 8.50e-87
  • rbh
sigma 28 (flagella/sporulation) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 244.0
  • Bit_score: 327
  • Evalue 2.40e-87
  • rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 244.0
  • Bit_score: 327
  • Evalue 1.20e-86

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Taxonomy

Thiomicrospira crunogena → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGACGCCCGTTAAAGCCTATGCACGTATGCAAAAGCAACAAACTTCTCTGAGCGAGCAAATTGAAGCTCACACAGATTTAGTCAAGCGTATTGCTTATCATCTTAAGGGGCGTTTGCCTTCGAGTGTGCAAGTGGACGACTTGGTGCAATCAGGCATGATTGGGTTGATTGAAGCCGTACAAAAGTACGATGCTAGTCAAGGTGCGAGTTTTGAAACCTATGCAGGTATTCGTATCCGTGGTGCTATGTTGGATGAAATTCGTAAAGGTGATTGGACACCCAGATCGGTGCATCGTAAGTCTCGTGAAGTGTCTGAGGCAATCCGATCAATCGAAGCGACGACAGGACGAGAAGCGAAAGATGAGGAAGTTGCTAAGTTAATGGGCGTTTCCATGACGGAATATCATCAAATTTTGCAAGACTCGGTAACCACGCAAGTATTATCTATCGATATGCCAGACCATGATGAGTTATCTGAAGACCAGTTGAGTTTGAATAATGCTTCGGATATGGCTGAACCCATGCAAGAGTTAATGCAATCTCAATTTCAAGGTCAGTTAGCCGAGGCGATCGCCAGCTTGCCAGAGCGTGAACAATTGGTAATGTCTTTATATTATGACGAAGAGTTAAATTTGAAAGAGATTGGTGAAGTGTTGAATGTCAGTGAATCGCGCGTTTGCCAGATTCACGGTCAAGCTTTGTTGCGTATCCGTTCGCGCTTAAAAGAATGGGCTGAATAG
PROTEIN sequence
Length: 247
MTPVKAYARMQKQQTSLSEQIEAHTDLVKRIAYHLKGRLPSSVQVDDLVQSGMIGLIEAVQKYDASQGASFETYAGIRIRGAMLDEIRKGDWTPRSVHRKSREVSEAIRSIEATTGREAKDEEVAKLMGVSMTEYHQILQDSVTTQVLSIDMPDHDELSEDQLSLNNASDMAEPMQELMQSQFQGQLAEAIASLPEREQLVMSLYYDEELNLKEIGEVLNVSESRVCQIHGQALLRIRSRLKEWAE*