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ar4r2_scaffold_748

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_748_1
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..323)
DNA (321bp) protein (107aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTC9_ALLVD
ar4r2_scaffold_748_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(465..860)
DNA (396bp) protein (132aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000361131F
FKBP-type peptidylprolyl isomerase
ar4r2_scaffold_748_3
unknown

Not on your lists

comp(879..1169)
DNA (291bp) protein (97aa)

This feature has no annotations

ar4r2_scaffold_748_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1258..2376
DNA (1119bp) protein (373aa)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8M1_THICA rbh
tRNA-specific 2-thiouridylase mnmA rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_748_5
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2381..3061
DNA (681bp) protein (227aa)
High frequency lysogenization protein HflD homolog n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GN0_THICR
hypothetical protein
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3148..4377)
DNA (1230bp) protein (410aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HL8_THICR rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABB41355.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4472..5596)
DNA (1125bp) protein (375aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
response regulator receiver (CheY-like) modulated CheB methylesterase (EC:3.1.1.61) rbh
chemotaxis protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036043B9 rbh
ar4r2_scaffold_748_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5634..6464)
DNA (831bp) protein (277aa)
chemotaxis protein CheR (EC:2.1.1.80) rbh
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Chemotaxis protein methyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HM0_THICR rbh
ar4r2_scaffold_748_9
unknown

Not on your lists

6555..7718
DNA (1164bp) protein (388aa)

This feature has no annotations

ar4r2_scaffold_748_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7711..8019
DNA (309bp) protein (103aa)
FlhB domain protein n=1 Tax=Shewanella sp. (strain MR-7) RepID=Q0HWY0_SHESR
FlhB domain-containing protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_748_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8016..8543)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037C760A
chemotaxis protein CheW
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_748_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8548..10542)
DNA (1995bp) protein (665aa)
CheA signal transduction histidine kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HM7_THICR rbh
CheA signal transduction histidine kinase rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_748_13
unknown

Not on your lists

comp(10628..11083)
DNA (456bp) protein (152aa)

This feature has no annotations

ar4r2_scaffold_748_14
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11144..11536)
DNA (393bp) protein (131aa)
Chemotaxis response regulator CheY n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HM9_THICR
response regulator receiver domain-containing protein
Chemotaxis response regulator CheY {ECO:0000313|EMBL:ABB41344.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_15
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11565..12305)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor FliA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HN0_THICR rbh
sigma 28 (flagella/sporulation) rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_16
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12309..13163)
DNA (855bp) protein (285aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Thiomicrospira arctica RepID=UPI00035CFF25
cobyrinic acid a,c-diamide synthase
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_17
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13156..14364)
DNA (1209bp) protein (403aa)
flagellar biosynthesis regulator FlhF n=1 Tax=Thiomicrospira halophila RepID=UPI000361B666 rbh
flhF; flagellar biosynthesis regulator FlhF rbh
Flagellar biosynthesis component FlhF {ECO:0000313|EMBL:ABB41341.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_18
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14375..16453)
DNA (2079bp) protein (693aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HN3_THICR rbh
flagellar biosynthesis protein FlhA rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ABB41340.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16551..17678)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037D5D78
flagellar biosynthesis protein FlhB
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:AHF01567.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_748_20
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17680..18462)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037CD83E
flagellar biosynthesis protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_748_21
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18620..18889)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HN6_THICR
flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:ABB41337.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18901..19656)
DNA (756bp) protein (252aa)
Flagellar biosynthetic protein FliP n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HN7_THICR rbh
fliP; flagellar biosynthesis protein FliP rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_748_23
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19653..20108)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037A0162
flagellar biosynthesis protein FliQ
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI85714.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
ar4r2_scaffold_748_24
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20118..20555)
DNA (438bp) protein (146aa)
Flagellar motor switch protein FliN n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBH9_9GAMM
fliN; flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AHF01572.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_748_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20556..21581)
DNA (1026bp) protein (342aa)
flagellar motor switch protein FliM n=1 Tax=Thiomicrospira halophila RepID=UPI000372AD24 rbh
flagellar motor switch protein FliM rbh
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_748_26
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21605..22189)
DNA (585bp) protein (195aa)
Flagellar basal body-associated protein FliL n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FP8_THICR
Flagellar basal body protein FliL {ECO:0000313|EMBL:KDN95395.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
flagellar basal body protein FliL
ar4r2_scaffold_748_27
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22209..23096)
DNA (888bp) protein (296aa)
Flagellar motor protein MotB n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FP7_THICR rbh
OmpA/MotB protein rbh
Flagellar motor protein MotB {ECO:0000313|EMBL:ABB42026.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_28
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23182..24033)
DNA (852bp) protein (284aa)
Flagellar motor protein MotA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FP6_THICR rbh
Flagellar motor protein MotA {ECO:0000313|EMBL:KDN95397.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
chemotaxis protein rbh
ar4r2_scaffold_748_29
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24085..25092)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00035DFD51
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABB42028.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_748_30
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25139..26080)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037BAC64
Uncharacterized protein {ECO:0000313|EMBL:KDN95399.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
flagellar hook-length control protein
Displaying 30 items

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