ggKbase home page

ar4r2_scaffold_7982

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_7982_1
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3..593
DNA (591bp) protein (197aa)
50S ribosomal protein L3 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=RL3_THISH
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ar4r2_scaffold_7982_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


593..1198
DNA (606bp) protein (202aa)
50S ribosomal protein L4 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXH3_HALNC
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1195..1491
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RL23_DECAR
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
ar4r2_scaffold_7982_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1513..2337
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXH5_HALNC rbh
50S ribosomal protein L2 rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_5
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2353..2628
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WBV2_9GAMM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
30S ribosomal protein S19
ar4r2_scaffold_7982_6
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2640..2972
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E0C9_9GAMM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
rplV; 50S ribosomal subunit protein L22
ar4r2_scaffold_7982_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2985..3656
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXH8_HALNC rbh
30S ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3667..4080
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXH9_HALNC
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_9
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4080..4271
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Dyella ginsengisoli RepID=UPI00034978A2
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
50S ribosomal protein L29
ar4r2_scaffold_7982_10
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4274..4534
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Oceanimonas smirnovii RepID=UPI0003696DD8
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
rpsQ; 30S ribosomal protein S17
ar4r2_scaffold_7982_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4545..4913
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI2_HALNC
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_12
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4931..5248
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G718_9GAMM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
rplX; 50S ribosomal protein L24
ar4r2_scaffold_7982_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5258..5797
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI4_HALNC
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5808..6113
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B60885
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
30S ribosomal protein S14
ar4r2_scaffold_7982_15
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6129..6521
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G721_9GAMM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
rpsH; 30S ribosomal protein S8
ar4r2_scaffold_7982_16
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6540..7073
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GEC0_9GAMM
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
ar4r2_scaffold_7982_17
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7114..7470
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=RL18_SACD2
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
ar4r2_scaffold_7982_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7479..7988
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI9_HALNC
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_19
GWC2_Pseudomonadales_63_15_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7993..8181
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=2 Tax=Pseudomonas RepID=F6AJC4_PSEF1
50S ribosomal protein L30
Tax=GWC2_Pseudomonadales_63_15_curated
ar4r2_scaffold_7982_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8184..8609
DNA (426bp) protein (142aa)
50S ribosomal protein L15 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ1_HALNC
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_7982_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8613..9704
DNA (1092bp) protein (364aa)
Protein translocase subunit SecY n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ2_HALNC rbh
preprotein translocase subunit SecY rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying 21 items

View Taxonomy