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ar4r2_scaffold_963

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_963_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Bacterioferritin n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQE7_9GAMM
bacterioferritin
ar4r2_scaffold_963_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173..643)
DNA (471bp) protein (157aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
bacterioferritin n=1 Tax=Leucothrix mucor RepID=UPI0003B637A9
bacterioferritin
ar4r2_scaffold_963_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

910..1608
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQC1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ33564.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_963_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1605..2678
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQC2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ33565.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein rbh
ar4r2_scaffold_963_5
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2675..3397
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DFH7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGW54898.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
hypothetical protein
ar4r2_scaffold_963_6
unknown

Not on your lists

3630..3962
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B78800
ar4r2_scaffold_963_7
unknown

Not on your lists

3973..4203
DNA (231bp) protein (77aa)

This feature has no annotations

ar4r2_scaffold_963_8
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4283..6382
DNA (2100bp) protein (700aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4E143 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ16451.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas numazuensis.;"
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor rbh
ar4r2_scaffold_963_9
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6397..7440
DNA (1044bp) protein (348aa)
Hemin degrading factor n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1U3R4_PSEME
Hemin degrading factor {ECO:0000313|EMBL:ERH49677.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EGD-AQ5.;"
hemin transport protein HemS
ar4r2_scaffold_963_10
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7453..8019
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000363283D
hugZ; heme oxygenase
Putative heme iron utilization protein putative heme oxygenase {ECO:0000313|EMBL:CCE25423.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
ar4r2_scaffold_963_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8099..8473)
DNA (375bp) protein (125aa)
glyoxalase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D93FF
putative bleomycin resistance protein
Putative bleomycin resistance protein {ECO:0000313|EMBL:ABS63764.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
ar4r2_scaffold_963_12
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8488..8799)
DNA (312bp) protein (104aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Z6J1_9RHIZ
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EMS43944.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
antibiotic biosynthesis monooxygenase
ar4r2_scaffold_963_13
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8980..10254
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B58638
Uncharacterized protein {ECO:0000313|EMBL:KHD04336.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
conserved hypothetical protein
ar4r2_scaffold_963_14
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

10376..11254
DNA (879bp) protein (293aa)
ABC transporter substrate-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B52C65 rbh
hemin-binding periplasmic protein
Hemin-binding periplasmic protein {ECO:0000313|EMBL:BAC88521.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
ar4r2_scaffold_963_15
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11261..12310
DNA (1050bp) protein (350aa)
ABC transporter permease n=1 Tax=Leucothrix mucor RepID=UPI0003B5D39A rbh
hmuU_[H]; Hemin ABC transporter, permease protein rbh
Hemin ABC transporter, permease protein {ECO:0000313|EMBL:AGA32299.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
ar4r2_scaffold_963_16
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12310..13125
DNA (816bp) protein (272aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
iron-chelate-transporting ATPase (EC:3.6.3.34)
hemin ABC transporter ATP-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B44D29 rbh
ar4r2_scaffold_963_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13138..14160
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B3371A rbh
Hemin-degrading family protein {ECO:0000313|EMBL:EHQ30765.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hemS; Hemin transport protein hmuS
ar4r2_scaffold_963_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14447..15202)
DNA (756bp) protein (252aa)
TonB family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQD6_9GAMM rbh
TonB family protein {ECO:0000313|EMBL:EIJ33579.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
TonB family protein
ar4r2_scaffold_963_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15199..15582)
DNA (384bp) protein (128aa)
TonB system transport protein ExbD n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQD7_9GAMM
TonB system transport protein ExbD {ECO:0000313|EMBL:EIJ33580.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
biopolymer transport protein ExbD/TolR
ar4r2_scaffold_963_20
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15579..16010)
DNA (432bp) protein (144aa)
Outer membrane transport energization protein ExbB n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQD8_9GAMM
Outer membrane transport energization protein ExbB {ECO:0000313|EMBL:EIJ33581.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
biopolymer transporter ExbB
ar4r2_scaffold_963_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16140..17246)
DNA (1107bp) protein (369aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQD9_9GAMM rbh
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:EIJ33582.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase rbh
ar4r2_scaffold_963_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17427..19703
DNA (2277bp) protein (759aa)
TonB-dependent siderophore receptor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQE0_9GAMM rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EIJ33583.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
putative outer membrane TonB-dependent receptor rbh
ar4r2_scaffold_963_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19794..20477
DNA (684bp) protein (228aa)
PKHD-type hydroxylase Thini_0959 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
PKHD-type hydroxylase (EC:1.14.11.-) rbh
PKHD-type hydroxylase Thini_0959 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQE1_9GAMM rbh
ar4r2_scaffold_963_24
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20489..21496
DNA (1008bp) protein (336aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQE2_9GAMM rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EIJ33585.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Ferric iron ABC transporter, iron-binding protein rbh
ar4r2_scaffold_963_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21524..21973)
DNA (450bp) protein (150aa)
cytochrome-c peroxidase (EC:1.11.1.5)
Di-heme cytochrome c peroxidase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQI4_9GAMM
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:EIJ33627.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Displaying 25 items

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