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ar4r2_scaffold_1139

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1139_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68..1732)
DNA (1665bp) protein (555aa)
ATP-binding cassette protein, ChvD family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX73_9GAMM rbh
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:EIJ35966.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ABC transporter rbh
ar4r2_scaffold_1139_2
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1801..3696)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00037A1AEB rbh
Capsular biosynthesis protein {ECO:0000313|EMBL:KJV24772.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
polysaccharide biosynthesis protein rbh
ar4r2_scaffold_1139_3
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3757..4308)
DNA (552bp) protein (184aa)
Lipid carrier : UDP-N-acetylgalactosaminyltransferase {ECO:0000313|EMBL:KDE41146.1}; EC=2.4.1.- {ECO:0000313|EMBL:KDE41146.1};; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
Sugar transferase n=1 Tax=Alishewanella agri BL06 RepID=I9DTB5_9ALTE
sugar transferase
ar4r2_scaffold_1139_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4315..4920)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003632B5D
Uncharacterized protein {ECO:0000313|EMBL:EIJ34205.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_1139_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4952..5893)
DNA (942bp) protein (314aa)
NAD-dependent dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003626DC6 rbh
UDP-glucose 4-epimerase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ar4r2_scaffold_1139_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5890..7026)
DNA (1137bp) protein (379aa)
Glycosyl transferase, group 1 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124Y2_POLSJ rbh
group 1 glycosyl transferase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ar4r2_scaffold_1139_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7040..8188)
DNA (1149bp) protein (383aa)
Glycosyl transferase group 1 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCN8_ACIET rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACM32038.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
ar4r2_scaffold_1139_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8185..9042)
DNA (858bp) protein (286aa)
epimerase n=1 Tax=Variovorax paradoxus RepID=UPI0003783F8E rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AGU47943.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
ar4r2_scaffold_1139_9
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9045..10088)
DNA (1044bp) protein (348aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WUM8_9ENTR rbh
ar4r2_scaffold_1139_10
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10117..11457)
DNA (1341bp) protein (447aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E2I9_9GAMM rbh
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:EGZ49638.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
HlyD family type I secretion membrane fusion protein
ar4r2_scaffold_1139_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11454..13166)
DNA (1713bp) protein (571aa)
Type I secretion system ATPase, PrtD id=1274894 bin=GWE1_Burkholderiales_65_30 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Type I secretion system ATPase PrtD rbh
Tax=GWE1_Burkholderiales_65_30_curated
ar4r2_scaffold_1139_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13166..14479)
DNA (1314bp) protein (438aa)
TolC family type I secretion outer membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8S1_9PROT
TolC family type I secretion outer membrane protein
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:BAN36717.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
ar4r2_scaffold_1139_13
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(14562..16055)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003818EBC rbh
Hemolysin-type calcium-binding region:Peptidase M10A and M12B, matrixin and adamalysin {ECO:0000313|EMBL:EAT59474.1}; Flags: Precursor;; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
rhizobiocin
ar4r2_scaffold_1139_14
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16142..18502)
DNA (2361bp) protein (787aa)
Outer membrane adhesin like proteiin n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U373_SULKY rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE57148.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
outer membrane adhesin-like protein rbh
ar4r2_scaffold_1139_15
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18595..19854)
DNA (1260bp) protein (420aa)
Glycosyltransferase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YC90_THIV6 rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AFL74608.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
ar4r2_scaffold_1139_16
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19890..20477)
DNA (588bp) protein (196aa)
Methyltransferase family protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YC91_THIV6
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AFL74609.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
Displaying 16 items

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