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ar4r2_scaffold_1742

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1742_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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357..1418
DNA (1062bp) protein (354aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
23S rRNA pseudouridine synthase D n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B59C4B rbh
rluD; ribosomal large subunit pseudouridine synthase D rbh
ar4r2_scaffold_1742_2

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1448..2767
DNA (1320bp) protein (440aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S03H2_S23598 {ECO:0000313|EMBL:GAH87496.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ar4r2_scaffold_1742_3
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2905..4113
DNA (1209bp) protein (403aa)
Protein AmpG id=2170801 bin=GWB2_Nitrospirae_rel_47_37 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
ampG; integral membrane signal transducer protein rbh
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
ar4r2_scaffold_1742_4
Idiomarina sp. MCCC 1A10513, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4224..5090
DNA (867bp) protein (289aa)
Protein ProQ homolog n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KX04_9GAMM
RNA chaperone ProQ {ECO:0000256|HAMAP-Rule:MF_00749, ECO:0000256|SAAS:SAAS00012015}; TaxID=1517416 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. MCCC 1A10513.;"
ProQ activator of osmoprotectant transporter ProP
ar4r2_scaffold_1742_5
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5118..5975
DNA (858bp) protein (286aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4T6_NITHN rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADE13359.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
ar4r2_scaffold_1742_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6136..7002
DNA (867bp) protein (289aa)
DNA gyrase inhibitor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIJ3_AZOSU rbh
DNA gyrase inhibitor rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ar4r2_scaffold_1742_7
unknown

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comp(7051..7533)
DNA (483bp) protein (161aa)

This feature has no annotations

ar4r2_scaffold_1742_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7526..7957)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1N1_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96604.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1742_9
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8013..9008
DNA (996bp) protein (332aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24) rbh
delta-aminolevulinic acid dehydratase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035D5EC2 rbh
ar4r2_scaffold_1742_10
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9130..10473
DNA (1344bp) protein (448aa)
Filamentation induced by cAMP protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2J0_9RHOO rbh
fic; filamentation induced by cAMP protein rbh
Filamentation induced by cAMP protein {ECO:0000313|EMBL:BAL26849.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
ar4r2_scaffold_1742_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10478..11611
DNA (1134bp) protein (378aa)
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000255|HAMAP-Rule:MF_01012}; EC=2.1.1.189 {ECO:0000255|HAMAP-Rule:MF_01012};; 23S rRNA(m5U747)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01012}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=RLMC_HALNC rbh
23S rRNA (uracil-5-)-methyltransferase RumB rbh
ar4r2_scaffold_1742_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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11658..12443
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZF5_9PROT
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_1742_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12507..13013)
DNA (507bp) protein (169aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Peptide deformylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVM2_HALNC
ar4r2_scaffold_1742_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13015..13539)
DNA (525bp) protein (175aa)
Amino acid-binding ACT domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVM3_HALNC
amino acid-binding ACT domain-containing protein
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ACX96853.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying 14 items

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