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ar4r2_scaffold_2235

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2235_1
unknown

Not on your lists

comp(2..325)
DNA (324bp) protein (108aa)

This feature has no annotations

ar4r2_scaffold_2235_2
unknown

Not on your lists

comp(318..632)
DNA (315bp) protein (105aa)

This feature has no annotations

ar4r2_scaffold_2235_3
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(637..1587)
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida.;"
Thioredoxin reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Pseudoalteromonas sp. NJ631 RepID=UPI00031B9874 rbh
ar4r2_scaffold_2235_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1644..2438)
DNA (795bp) protein (265aa)
ABC transporter related protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DIS8_9GAMM
ABC transporter
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_2235_5
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2435..3394)
DNA (960bp) protein (320aa)
Transport system permease protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DE52_9GAMM rbh
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AHE99362.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
ar4r2_scaffold_2235_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3471..4367)
DNA (897bp) protein (299aa)
Rhodanese-like thiosulfate sulfurtransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DY6_THICR
rhodanese-like protein
Rhodanese-like thiosulfate sulfurtransferase {ECO:0000313|EMBL:ABB42637.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
ar4r2_scaffold_2235_7
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4425..5330)
DNA (906bp) protein (302aa)
Periplasmic binding protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DE51_9GAMM
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHE99363.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
ar4r2_scaffold_2235_8
CG_Proteo_01, Proteobacteria, Bacteria

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comp(5327..6070)
DNA (744bp) protein (248aa)
cobS; CobS (EC:2.7.8.26)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI0003645A42
Tax=CG_Proteo_01
ar4r2_scaffold_2235_9
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6082..6663)
DNA (582bp) protein (194aa)
Phosphoglycerate mutase (EC:5.4.2.1)
Phosphoglycerate mutase {ECO:0000313|EMBL:AGA35121.1}; EC=5.4.2.- {ECO:0000313|EMBL:AGA35121.1};; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
Phosphoglycerate mutase n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E3A5_THIND
ar4r2_scaffold_2235_10
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6667..7725)
DNA (1059bp) protein (353aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DE48_9GAMM rbh
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
ar4r2_scaffold_2235_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7722..8243)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037ACB5B
cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_2235_12
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8231..9685)
DNA (1455bp) protein (485aa)
cobyric acid synthase (EC:6.3.5.10) rbh
Cobyric acid synthase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z753_PSEAC rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
ar4r2_scaffold_2235_13
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9703..10200)
DNA (498bp) protein (166aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:AEG31344.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AEG31344.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Cob(I)alamin adenosyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBV8_THICA
ar4r2_scaffold_2235_14
Pasteurella multocida, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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10721..10957
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pasteurella multocida subsp. gallicida X73 RepID=K0Y5Z3_PASMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESQ71378.1}; TaxID=1331042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella.;" source="Pasteurella multocida subsp. multocida P1062.;"
Displaying 14 items

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