ggKbase home page

ar4r2_scaffold_1722

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1722_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..560
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003632540
Uncharacterized protein {ECO:0000313|EMBL:CDH44170.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
ar4r2_scaffold_1722_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1071..1646
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380CFDD
Uncharacterized protein {ECO:0000313|EMBL:GAD24527.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ar4r2_scaffold_1722_3
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1737..2558
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003678F13 rbh
alpha/beta hydrolase
Tax=CG_Syntroph_02
ar4r2_scaffold_1722_4
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2688..3410
DNA (723bp) protein (241aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FQ39_PSYA2
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AAZ19869.1}; TaxID=259536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter arcticus (strain DSM 17307 / 273-4).;"
ar4r2_scaffold_1722_5
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3407..4981
DNA (1575bp) protein (525aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
Signal transduction histidine kinase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S9I2_HAHCH
signal transduction histidine kinase
ar4r2_scaffold_1722_6
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4992..6488)
DNA (1497bp) protein (499aa)
Guanosine-5'-triphosphate,3'-diphosphate diphosphatase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV32_NITHN rbh
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AHK79848.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
ar4r2_scaffold_1722_7
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6536..7057)
DNA (522bp) protein (174aa)
Phosphohistidine phosphatase SixA n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6Y1_9GAMM
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EHQ53568.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
putative phosphohistidine phosphatase SixA
ar4r2_scaffold_1722_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7059..8828)
DNA (1770bp) protein (590aa)
Putative sulfate permease n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MN06_PSEPS rbh
Putative sulfate permease {ECO:0000313|EMBL:ELS29277.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
putative SulP family transporter rbh
ar4r2_scaffold_1722_9
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8825..10873)
DNA (2049bp) protein (683aa)
Glucosyltransferase MdoH n=1 Tax=Desulfovibrio sp. X2 RepID=S7V3H7_9DELT rbh
Glucosyltransferase MdoH {ECO:0000313|EMBL:EPR41074.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
glucosyltransferase MdoH rbh
ar4r2_scaffold_1722_10
unknown

Not on your lists

comp(10968..11441)
DNA (474bp) protein (158aa)

This feature has no annotations

ar4r2_scaffold_1722_11
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11556..12206)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BL41_9GAMM
ABC-type uncharacterized transport system, auxiliary component
Tax=CG_Gallio_02
ar4r2_scaffold_1722_12

Not on your lists

comp(12329..13273)
DNA (945bp) protein (315aa)
ABC transport system periplasmic substrate binding protein n=1 Tax=uncultured organism RepID=M1Q0H5_9ZZZZ
ABC transport system periplasmic substrate binding protein {ECO:0000313|EMBL:AGF87146.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
ar4r2_scaffold_1722_13
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13277..14062)
DNA (786bp) protein (262aa)
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X3U7_THIK1 rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:CDW92811.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ar4r2_scaffold_1722_14
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14059..15201)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BL44_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR23032.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
putative ABC-type transport system, permease component
ar4r2_scaffold_1722_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15210..15596)
DNA (387bp) protein (129aa)
Invasion gene expression up-regulator SirB n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB0_HALNC
invasion gene expression up-regulator SirB
Invasion gene expression up-regulator SirB {ECO:0000313|EMBL:ACX95124.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1722_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15775..16746)
DNA (972bp) protein (324aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB1_HALNC rbh
C4-dicarboxylate transporter/malic acid transport protein rbh
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ACX95125.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1722_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17003..17317
DNA (315bp) protein (105aa)
cytochrome C n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003694E79
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ACL73954.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Displaying 17 items

View Taxonomy