ggKbase home page

ar4r2_scaffold_2419

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2419_1
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..685
DNA (684bp) protein (228aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01569}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01569};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Proline--tRNA ligase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=SYP_METCA
ar4r2_scaffold_2419_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(762..1142)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KDR88273.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
ar4r2_scaffold_2419_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1527..2312)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYR7_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95590.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_2419_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2309..3631)
DNA (1323bp) protein (441aa)
transporter n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000363477B
outer membrane channel protein TolC
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_2419_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3628..4188)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYR5_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95588.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_2419_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4179..4703)
DNA (525bp) protein (175aa)
Putative thiol-disulfide oxidoreductase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDF3_9GAMM
thioredoxin
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_2419_7
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..5292)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FH00_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGW53969.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
hypothetical protein
ar4r2_scaffold_2419_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5553..6095
DNA (543bp) protein (181aa)
NAD(P)H dehydrogenase (quinone) n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX38_NITHN
flavoprotein WrbA
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_2419_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6188..7012
DNA (825bp) protein (275aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYR1_HALNC rbh
UTP-glucose-1-phosphate uridylyltransferase rbh
ar4r2_scaffold_2419_10
Pseudomonas sp. RIT288, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7012..7500
DNA (489bp) protein (163aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1470589 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT288.;"
peptidyl-prolyl cis-trans isomerase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B4E64C
FKBP-type peptidyl-prolyl cis-trans isomerase
ar4r2_scaffold_2419_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7662..8435
DNA (774bp) protein (258aa)
CbbY n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000380A2F9 rbh
HAD-superfamily hydrolase rbh
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ACL72120.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ar4r2_scaffold_2419_12
unknown

Not on your lists

8746..9183
DNA (438bp) protein (146aa)

This feature has no annotations

ar4r2_scaffold_2419_13
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9199..10200)
DNA (1002bp) protein (334aa)
exodeoxyribonuclease I (EC:3.1.11.1)
Exodeoxyribonuclease I {ECO:0000313|EMBL:ADZ27712.1}; EC=3.1.11.1 {ECO:0000313|EMBL:ADZ27712.1};; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
exonuclease I n=1 Tax=Dyella ginsengisoli RepID=UPI000347A36A
Displaying 13 items

View Taxonomy