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ar4r2_scaffold_1911

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1911_1
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..167
DNA (165bp) protein (55aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
ar4r2_scaffold_1911_2
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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911..1912
DNA (1002bp) protein (334aa)
Cytochrome oxidase assembly n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J232_9GAMM
Cytochrome oxidase assembly {ECO:0000313|EMBL:EGW19788.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
cytochrome oxidase assembly
ar4r2_scaffold_1911_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2009..2305
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVG6_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96796.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1911_4
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2327..2980
DNA (654bp) protein (218aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
leucyl/phenylalanyl-tRNA/protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DWB4_9GAMM
ar4r2_scaffold_1911_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3276..4550
DNA (1275bp) protein (425aa)
Sulfide-quinone reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUS4_THIA3 rbh
sqr; Sulfide-quinone reductase rbh
Sulfide-quinone reductase {ECO:0000313|EMBL:CAZ89043.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
ar4r2_scaffold_1911_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4586..5572
DNA (987bp) protein (329aa)
Conserved hypothetical membrane protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0J0_HALNC
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:ACX96213.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1911_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5672..6664
DNA (993bp) protein (331aa)
Glycosyl transferase family 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZK4_HALNC rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACX95877.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1911_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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6649..7482
DNA (834bp) protein (278aa)
Phosphoesterase, PA-phosphatase related protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACG6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO35490.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
phosphoesterase, PA-phosphatase related protein
ar4r2_scaffold_1911_9
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7531..7896)
DNA (366bp) protein (122aa)
tRNA pseudouridine synthase C n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I239_PSEUO
Protein YqcC {ECO:0000313|EMBL:EXF43518.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
hypothetical protein
ar4r2_scaffold_1911_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7862..8710)
DNA (849bp) protein (283aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7) rbh
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ACL73497.1}; EC=2.7.4.7 {ECO:0000313|EMBL:ACL73497.1};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Phosphomethylpyrimidine kinase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLE2_THISH rbh
ar4r2_scaffold_1911_11
Pseudoalteromonas elyakovii, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8799..9116
DNA (318bp) protein (106aa)
ligand-binding protein SH3 n=1 Tax=Pseudoalteromonas flavipulchra RepID=UPI000299F07C
Membrane protein {ECO:0000313|EMBL:KID39697.1}; TaxID=81037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas elyakovii.;"
membrane protein
ar4r2_scaffold_1911_12
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9015..10316)
DNA (1302bp) protein (434aa)
Multifunctional CCA protein {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; CCA-adding enzyme {ECO:0000255|HAMAP-Rule:MF_01261}; EC=2.7.7.72 {ECO:0000255|HAMAP-Rule:MF_01261};; CCA tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA CCA-pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA adenylyl-/cytidylyl-transferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA-NT {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; 2'-nucleotidase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.3.- {ECO:0000255|HAMAP-Rule:MF_01261};; Includes:; 2',3'-cyclic phosphodiesterase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.4.- {ECO:0000255|HAMAP-Rule:MF_01261};; Includes:; Phosphatase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.3.- {ECO:0000255|HAMAP-Rule:MF_01261};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Multifunctional CCA protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=CCA_THISH rbh
tRNA nucleotidyltransferase rbh
ar4r2_scaffold_1911_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10389..11366
DNA (978bp) protein (326aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L066_HALNC rbh
hypothetical protein rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACX96089.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_1911_14
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11502..12161
DNA (660bp) protein (220aa)
OmpA/MotB domain protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AD70_NITEC
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP48511.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
ar4r2_scaffold_1911_15
unknown

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12567..12716
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 15 items

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