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ar4r2_scaffold_1074

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1074_1
unknown

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2..112
DNA (111bp) protein (37aa)

This feature has no annotations

ar4r2_scaffold_1074_2
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

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109..1992
DNA (1884bp) protein (628aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
DNA primase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CER9_9LEPT rbh
dnaG; DNA primase rbh
ar4r2_scaffold_1074_3
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2096..3835
DNA (1740bp) protein (580aa)
RNA polymerase sigma factor RpoD n=1 Tax=Leptonema illini DSM 21528 RepID=H2CER8_9LEPT rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
rpoD; RNA polymerase sigma factor RpoD rbh
ar4r2_scaffold_1074_4
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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4024..4644
DNA (621bp) protein (207aa)
fumarylacetoacetate (faa) hydrolase id=4224199 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
fumarylacetoacetate (FAA) hydrolase
Tax=GWF2_Bacteroidetes_33_38_curated
ar4r2_scaffold_1074_5
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(4750..5670)
DNA (921bp) protein (307aa)
LysR substrate-binding domain protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6I882_9LEPT
LysR substrate-binding domain protein {ECO:0000313|EMBL:EQA54092.1}; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
LysR family transcriptional regulator
ar4r2_scaffold_1074_6
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5828..7231
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Leptonema illini DSM 21528 RepID=H2CJZ5_9LEPT rbh
isopropylmalate isomerase large subunit rbh
ar4r2_scaffold_1074_7
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7313..7942
DNA (630bp) protein (210aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Leptonema illini DSM 21528 RepID=H2CKL9_9LEPT
leuD; isopropylmalate isomerase small subunit
ar4r2_scaffold_1074_8
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7974..8774)
DNA (801bp) protein (267aa)
Transcriptional regulator, AraC family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK28_SYNFM
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABK17780.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
ar4r2_scaffold_1074_9
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8889..9278
DNA (390bp) protein (130aa)
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AIA54546.1}; EC=4.1.1.44 {ECO:0000313|EMBL:AIA54546.1};; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
Carboxymuconolactone decarboxylase n=2 Tax=Acidithiobacillus caldus RepID=F9ZMD7_ACICS
carboxymuconolactone decarboxylase
ar4r2_scaffold_1074_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9284..10354)
DNA (1071bp) protein (357aa)
molybdenum ABC transporter ATP-binding protein n=1 Tax=Methylovulum miyakonense RepID=UPI00035E0CC7 rbh
modC; molybdenum ABC transporter ATP-binding protein rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
ar4r2_scaffold_1074_11
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10365..11075)
DNA (711bp) protein (237aa)
molybdenum ABC transporter permease n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B6BB47 rbh
modB; molybdate ABC transporter permease rbh
ABC transporter, permease molybdate transporter {ECO:0000313|EMBL:CCE24059.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
ar4r2_scaffold_1074_12
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11094..11855)
DNA (762bp) protein (254aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E2C5_GEOLS
molybdenum ABC transporter periplasmic protein
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:ACD94178.1}; Flags: Precursor;; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
ar4r2_scaffold_1074_13
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11961..12401)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W0M0_DESIS
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
ar4r2_scaffold_1074_14
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12533..13771
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI00037D5829
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE98032.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
ar4r2_scaffold_1074_15
unknown

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comp(14097..14336)
DNA (240bp) protein (80aa)

This feature has no annotations

ar4r2_scaffold_1074_trna_1
unknown

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comp(14559..14642)
DNA (84bp)
transferRNA Leu
ar4r2_scaffold_1074_16
Leptospira terpstrae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

14772..15368
DNA (597bp) protein (199aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1257025 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VTX6_9LEPT
hisB; imidazoleglycerol-phosphate dehydratase
ar4r2_scaffold_1074_17
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15369..16061
DNA (693bp) protein (231aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Leptonema illini DSM 21528 RepID=H2CDH0_9LEPT
ar4r2_scaffold_1074_18
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16111..16872
DNA (762bp) protein (254aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CDG9_9LEPT
ar4r2_scaffold_1074_19
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16875..17372)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CKM2_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EHQ05077.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
ar4r2_scaffold_1074_20
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17476..18147)
DNA (672bp) protein (224aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM05472.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_1074_21
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18179..19450)
DNA (1272bp) protein (424aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
purA; adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CIF0_9LEPT rbh
ar4r2_scaffold_1074_22
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19540..19824)
DNA (285bp) protein (95aa)
tRNA synthetase class II (G H P and S) n=1 Tax=Leptonema illini DSM 21528 RepID=H2CIF1_9LEPT
tRNA synthetase class II (G H P and S) {ECO:0000313|EMBL:EHQ05944.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit
Displaying 23 items

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