ggKbase home page

ar4r2_scaffold_1169

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1169_1
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

802..1575
DNA (774bp) protein (258aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Sulfurovum sp. AR RepID=I2K4A5_9PROT rbh
ar4r2_scaffold_1169_2
Sulfurovum sp. NBC37-1, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

1575..2660
DNA (1086bp) protein (362aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=387093 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. (strain NBC37-1).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q6J5_SULNB rbh
ar4r2_scaffold_1169_3
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


2657..3670
DNA (1014bp) protein (338aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57) rbh
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Sulfurovum sp. AR RepID=I2K4A8_9PROT rbh
ar4r2_scaffold_1169_4
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3694..5328
DNA (1635bp) protein (545aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
DNA primase n=1 Tax=Sulfurovum sp. AR RepID=I2K630_9PROT rbh
dnaG; DNA primase DnaG rbh
ar4r2_scaffold_1169_5
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5357..5677)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z683_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB70903.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
ar4r2_scaffold_1169_6
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5873..6961
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SYS0_9HELI rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
ar4r2_scaffold_1169_7
Sulfurovum sp. PC08-66, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6965..7501)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL17 RepID=UPI00035EBE73
Uncharacterized protein {ECO:0000313|EMBL:KIM07590.1}; TaxID=1539063 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. PC08-66.;"
hypothetical protein
ar4r2_scaffold_1169_8
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7547..8866)
DNA (1320bp) protein (440aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Sulfurovum sp. AR RepID=I2K5X9_9PROT rbh
tRNA modifying enzyme rbh
ar4r2_scaffold_1169_9
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8987..9322
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM04314.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_1169_10
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..9959)
DNA (576bp) protein (192aa)
Cytochrome b n=1 Tax=Sulfurovum sp. AR RepID=I2K6M4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIM04315.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
cytochrome b
ar4r2_scaffold_1169_11
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10042..10878)
DNA (837bp) protein (279aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927, ECO:0000313|EMBL:KIM06035.1}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
formyltetrahydrofolate deformylase (EC:3.5.1.10) rbh
Formyltetrahydrofolate deformylase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X155_NITSE rbh
ar4r2_scaffold_1169_12
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

10945..12213
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI0003450828
Uncharacterized protein {ECO:0000313|EMBL:KIM06034.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
polysaccharide biosynthesis protein
ar4r2_scaffold_1169_13
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12188..12718
DNA (531bp) protein (177aa)
Acetyltransferase, CysE/LacA/LpxA/NodL family n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDG1_DESAR
CysE/LacA/LpxA/NodL family acetyltransferase
Acetyltransferase, CysE/LacA/LpxA/NodL family {ECO:0000313|EMBL:AEB10027.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
ar4r2_scaffold_1169_14
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

12723..13751
DNA (1029bp) protein (343aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM06033.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
group 1 glycosyl transferase id=7200872 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
glycosyl transferase family 1
ar4r2_scaffold_1169_15
Thiovulum sp. ES, Thiovulum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13808..14056
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Thiovulum sp. ES RepID=J1F814_9HELI
Uncharacterized protein {ECO:0000313|EMBL:EJF06416.1}; TaxID=1177931 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Thiovulum.;" source="Thiovulum sp. ES.;"
hypothetical protein
ar4r2_scaffold_1169_16
Thiovulum sp. ES, Thiovulum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

14053..14460
DNA (408bp) protein (136aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Thiovulum sp. ES RepID=J0UX95_9HELI
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:EJF06417.1}; TaxID=1177931 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Thiovulum.;" source="Thiovulum sp. ES.;"
twitching motility protein PilT
ar4r2_scaffold_1169_17
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

14460..15575
DNA (1116bp) protein (372aa)
Glycosyltransferase n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8ESN2_ARCB4 rbh
Glycosyl transferase {ECO:0000313|EMBL:KIM06032.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
glycosyltransferase rbh
ar4r2_scaffold_1169_18
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15612..16586
DNA (975bp) protein (325aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
tRNA-lysidine synthase (EC:6.3.4.-) rbh
tRNA(Ile)-lysidine synthase n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QCC7_SULNB rbh
ar4r2_scaffold_1169_19
RIFOXYD2_FULL_Sulfurimonas_34_21_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16588..18939)
DNA (2352bp) protein (784aa)
Two-component sensor histidine kinase/response regulator n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q4P5_NITSB
two-component sensor histidine kinase/response regulator
Tax=RIFOXYD2_FULL_Sulfurimonas_34_21_curated
ar4r2_scaffold_1169_20
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19106..19999)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=1 Tax=Sulfurovum sp. AR RepID=I2K5M1_9PROT rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KIM04835.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
LysR family transcriptional regulator rbh
ar4r2_scaffold_1169_21
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20050..20994)
DNA (945bp) protein (315aa)
para-aminobenzoate synthase component I (EC:2.6.1.85) rbh
Para-aminobenzoate synthase component I n=1 Tax=Sulfurovum sp. AR RepID=I2K798_9PROT rbh
Aminobenzoate synthetase {ECO:0000313|EMBL:KIM04834.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_1169_22
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20994..21872)
DNA (879bp) protein (293aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:KIM04833.1}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2) rbh
Aspartate carbamoyltransferase n=1 Tax=Sulfurovum sp. AR RepID=I2K797_9PROT rbh
ar4r2_scaffold_1169_23
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21947..22690)
DNA (744bp) protein (248aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7K8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIM08967.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
ar4r2_scaffold_1169_24
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22733..25075)
DNA (2343bp) protein (781aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7F3_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIM04832.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein rbh
ar4r2_scaffold_1169_25
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25101..25865)
DNA (765bp) protein (255aa)
Polysaccharide export protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7F2_9PROT
Polysaccharide export protein {ECO:0000313|EMBL:EIF51154.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
polysaccharide export protein
ar4r2_scaffold_1169_26
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


26069..27106
DNA (1038bp) protein (346aa)
Protein RecA n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y0L7_SULBS rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
protein RecA rbh
ar4r2_scaffold_1169_27
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

27168..28439
DNA (1272bp) protein (424aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:KIM04830.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:KIM04830.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11) rbh
enolase n=1 Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI00035E60D7 rbh
ar4r2_scaffold_1169_28
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

28408..28743
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0USY1_SULAO
Uncharacterized protein {ECO:0000313|EMBL:KIM08323.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
ar4r2_scaffold_1169_29
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

28764..29918
DNA (1155bp) protein (385aa)
Sodium-hydrogen antiporter n=1 Tax=Arcobacter sp. L RepID=G2HTV7_9PROT rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KIM04829.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
sodium-hydrogen antiporter rbh
ar4r2_scaffold_1169_30
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29923..31695)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Campylobacter ureolyticus ACS-301-V-Sch3b RepID=S3YNJ1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIM02635.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
AmtB
Displaying items 1-30 of 35 in total

View Taxonomy