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ar4r2_scaffold_1879

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1879_1
Sulfurovum sp. FS08-3, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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2..874
DNA (873bp) protein (291aa)
DEAD/DEAH box helicase {ECO:0000313|EMBL:KIM13242.1}; TaxID=1539065 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS08-3.;"
DEAD/DEAH box helicase
Restriction enzyme type I helicase subunit; type I restriction enzyme HsdR id=1266182 bin=GWE1_Spirochaetes_32_154 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes rbh
ar4r2_scaffold_1879_2

Not on your lists

871..1317
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PGX5_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97182.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
ar4r2_scaffold_1879_3
Sulfurospirillum barnesii, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1344..1595)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y051_SULBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL69575.1}; TaxID=760154 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3).;"
ar4r2_scaffold_1879_4
Sulfurospirillum sp. SCADC, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(1582..1821)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y052_SULBS
Uncharacterized protein {ECO:0000313|EMBL:KFL34546.1}; TaxID=1537915 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum sp. SCADC.;"
hypothetical protein
ar4r2_scaffold_1879_5
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1857..2519)
DNA (663bp) protein (221aa)
Putative metal-dependent hydrolase n=1 Tax=Campylobacter concisus UNSW1 RepID=U2EEP2_9PROT
Zinc metalloprotease {ECO:0000313|EMBL:KIM04462.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
ar4r2_scaffold_1879_6
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2529..3368)
DNA (840bp) protein (280aa)
HAD-superfamily hydrolase n=1 Tax=Sulfurovum sp. AR RepID=I2K9B6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIM04457.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
HAD-superfamily hydrolase
ar4r2_scaffold_1879_7
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3526..4869
DNA (1344bp) protein (448aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:KIM04456.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
transcription termination factor Rho n=1 Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI0003726C7C rbh
rho; transcription termination factor Rho rbh
ar4r2_scaffold_1879_8
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4872..5657
DNA (786bp) protein (262aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
Glutamate racemase n=1 Tax=Sulfurovum sp. AR RepID=I2K6Y2_9PROT rbh
glutamate racemase
ar4r2_scaffold_1879_9
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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5771..6028
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WYJ2_NITSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV46504.1}; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1).;"
ar4r2_scaffold_1879_10
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

6018..6152
DNA (135bp) protein (45aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_1879_11
unknown

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6133..6462
DNA (330bp) protein (110aa)

This feature has no annotations

ar4r2_scaffold_1879_12
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6471..7790)
DNA (1320bp) protein (440aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM06640.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
NLP/P60 protein id=4306975 bin=GWC2_OP3-like_45_7 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
NLP/P60 protein
ar4r2_scaffold_1879_13
Sulfurovum sp. FS08-3, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

7872..8150
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SB05_PELPB
Uncharacterized protein {ECO:0000313|EMBL:KIM07084.1}; TaxID=1539065 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS08-3.;"
hypothetical protein
ar4r2_scaffold_1879_14
Sulfurovum sp. FS08-3, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8152..8358
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM07085.1}; TaxID=1539065 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS08-3.;"
Putative uncharacterized protein id=4892291 bin=GWC2_ACD39_50_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
ar4r2_scaffold_1879_15
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8410..10866)
DNA (2457bp) protein (819aa)
Lon protease {ECO:0000256|PIRNR:PIRNR001174, ECO:0000313|EMBL:KIM04158.1}; EC=3.4.21.53 {ECO:0000256|PIRNR:PIRNR001174};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
lon; ATP-dependent Lon protease (EC:3.4.21.53) rbh
Lon protease n=1 Tax=Sulfurovum sp. AR RepID=I2K6W1_9PROT rbh
ar4r2_scaffold_1879_16
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10875..11522)
DNA (648bp) protein (216aa)
Putative lipoprotein n=1 Tax=Sulfurovum sp. AR RepID=I2K6W2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIM05925.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
ar4r2_scaffold_1879_17
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

11627..12814
DNA (1188bp) protein (396aa)
glycosyl hydrolase (EC:3.2.1.52) rbh
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri (strain RM4018).;"
Glycosyl hydrolase n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8ETM1_ARCB4 rbh
ar4r2_scaffold_1879_18
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13055..13534
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C0F3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN67731.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
Displaying 18 items

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