ggKbase home page

ar4r2_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_379_1
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..625)
DNA (624bp) protein (208aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
sau96IM; modification methylase Sau96I (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CKT0_9GAMM rbh
ar4r2_scaffold_379_2
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(630..1322)
DNA (693bp) protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00131176}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00064821};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00064819}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00131282}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
MTA/SAH nucleosidase (EC:3.2.2.9) rbh
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Sulfurovum sp. AR RepID=I2K6H2_9PROT rbh
ar4r2_scaffold_379_3
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1319..2263)
DNA (945bp) protein (315aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39) rbh
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Sulfurovum sp. AR RepID=I2K6H3_9PROT rbh
ar4r2_scaffold_379_4
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2337..3131)
DNA (795bp) protein (265aa)
Secreted protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M4R2_GRAFK
Uncharacterized protein {ECO:0000313|EMBL:KIM04609.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
ar4r2_scaffold_379_5
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3221..3751)
DNA (531bp) protein (177aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QB47_SULNB
ar4r2_scaffold_379_6
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3816..4643)
DNA (828bp) protein (276aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UQV1_SULAO
Uncharacterized protein {ECO:0000313|EMBL:KIM08295.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
ar4r2_scaffold_379_7
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4649..5215)
DNA (567bp) protein (189aa)
OmpA/MotB domain protein n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U1J5_SULKY
Uncharacterized protein {ECO:0000313|EMBL:KIM04607.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ompa/motb domain-containing protein
ar4r2_scaffold_379_8
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5229..6449)
DNA (1221bp) protein (407aa)
Translocation protein TolB n=1 Tax=Sulfurovum sp. AR RepID=I2K6I1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIM04606.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
tolB; translocation protein TolB rbh
ar4r2_scaffold_379_9
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6459..7382)
DNA (924bp) protein (308aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM04605.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_10
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7379..7783)
DNA (405bp) protein (135aa)
Cell division and transport-associated protein TolR n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X0D1_NITSE
Biopolymer transporter ExbD {ECO:0000313|EMBL:KIM04604.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
cell division and transport-associated protein tolr
ar4r2_scaffold_379_11
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7802..8623)
DNA (822bp) protein (274aa)
Biopolymer ExbB/TolQ family transporter n=1 Tax=Sulfurovum sp. AR RepID=I2K6I5_9PROT
Biopolymer transporter {ECO:0000313|EMBL:KIM08299.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
biopolymer ExbB/TolQ family transporter
ar4r2_scaffold_379_12
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8626..9012)
DNA (387bp) protein (129aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=ATPE_SULNB
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_13
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9031..10434)
DNA (1404bp) protein (468aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347, ECO:0000313|EMBL:KIM04602.1};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14) rbh
ATP synthase subunit beta n=1 Tax=Sulfurovum sp. AR RepID=I2K6I7_9PROT rbh
ar4r2_scaffold_379_14
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10450..11331)
DNA (882bp) protein (294aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14) rbh
ATP synthase gamma chain n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=ATPG_SULNB rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_15
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11341..12852)
DNA (1512bp) protein (504aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346, ECO:0000313|EMBL:KIM04600.1};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14) rbh
ATP synthase subunit alpha n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=ATPA_SULNB rbh
ar4r2_scaffold_379_16
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12869..13405)
DNA (537bp) protein (179aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Sulfurovum sp. AR RepID=I2K6J0_9PROT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_17
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13406..13942)
DNA (537bp) protein (179aa)
atpF; F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=ATPF_SULNB
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_18
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13958..14380)
DNA (423bp) protein (141aa)
atpF'; F0F1 ATP synthase subunit B' (EC:3.6.3.14)
F0F1-type ATP synthase, B' subunit n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QB64_SULNB
ATP synthase F0F1 subunit B {ECO:0000313|EMBL:KIM04597.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_19
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14436..15287)
DNA (852bp) protein (284aa)
Chromosome partitioning protein ParB n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QB65_SULNB
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KIM04596.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
chromosome partitioning protein ParB
ar4r2_scaffold_379_20
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15274..16068)
DNA (795bp) protein (265aa)
Chromosome segregation ATPase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X0C1_NITSE rbh
Sporulation initiation inhibitor Soj {ECO:0000313|EMBL:KIM04595.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
chromosome segregation atpase rbh
ar4r2_scaffold_379_21
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16065..16700)
DNA (636bp) protein (212aa)
birA; biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin-(Acetyl-CoA-carboxylase) ligase n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BMU2_9HELI
Uncharacterized protein {ECO:0000313|EMBL:KIM04594.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_22
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16681..17595)
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9) rbh
Methionyl-tRNA formyltransferase n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=FMT_SULNB rbh
ar4r2_scaffold_379_23
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17643..18407)
DNA (765bp) protein (255aa)
Glutamate 5-kinase {ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|SAAS:SAAS00186442};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
glutamate 5-kinase (EC:2.7.2.11) rbh
Glutamate 5-kinase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X0B8_NITSE rbh
ar4r2_scaffold_379_24
Sulfurovum lithotrophicum, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18389..19516)
DNA (1128bp) protein (376aa)
GTPase Obg n=1 Tax=Sulfurovum sp. AR RepID=I2K6J8_9PROT rbh
GTPase CgtA {ECO:0000313|EMBL:AKF24498.1}; TaxID=206403 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum lithotrophicum.;"
GTP-binding protein Obg rbh
ar4r2_scaffold_379_25
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19650..19904)
DNA (255bp) protein (85aa)
50S ribosomal protein L27 n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=RL27_SULNB
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:KIM02795.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
rpmA; 50S ribosomal protein L27
ar4r2_scaffold_379_26
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19915..20223)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Sulfurovum sp. AR RepID=I2K6K1_9PROT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
rplU; 50S ribosomal protein L21
ar4r2_scaffold_379_27
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20349..21683)
DNA (1335bp) protein (445aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54) rbh
3-deoxy-7-phosphoheptulonate synthase, class II n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q7G7_SULNB rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KIM05216.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar4r2_scaffold_379_28
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21732..22445)
DNA (714bp) protein (238aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01589};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
tRNA (cmo5U34)-methyltransferase n=1 Tax=Sulfurovum sp. AR RepID=I2K4R6_9PROT rbh
methyltransferase rbh
ar4r2_scaffold_379_29
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22442..23263)
DNA (822bp) protein (274aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26)
Riboflavin biosynthesis regulatory protein RibF n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q7G4_SULNB
ar4r2_scaffold_379_30
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23260..23985)
DNA (726bp) protein (242aa)
Hemolysin A n=1 Tax=Sulfurovum sp. AR RepID=I2K4R9_9PROT
Hemolysin {ECO:0000313|EMBL:KIM05213.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hemolysin A
Displaying items 1-30 of 45 in total

View Taxonomy