ggKbase home page

ar4r2_scaffold_3314

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3314_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..527)
DNA (525bp) protein (175aa)
Type II secretion system protein C (GspC) n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV07_9GAMM
Type II secretion system protein C (GspC) {ECO:0000313|EMBL:EIJ35200.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_3314_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(547..1563)
DNA (1017bp) protein (339aa)
UDP-glucuronate 5'-epimerase (EC:5.1.3.12) rbh
NAD-dependent epimerase/dehydratase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV08_9GAMM rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIJ35201.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_3314_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1578..2519)
DNA (942bp) protein (314aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV09_9GAMM rbh
ar4r2_scaffold_3314_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2562..3062
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV10_9GAMM rbh
ar4r2_scaffold_3314_5
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3231..4691
DNA (1461bp) protein (487aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Neisseria sp. GT4A_CT1 RepID=G3Z674_9NEIS rbh
Sel1 repeat protein {ECO:0000313|EMBL:EGC16482.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
Sel1 domain-containing protein
ar4r2_scaffold_3314_6
unknown

Not on your lists

5359..5646
DNA (288bp) protein (96aa)

This feature has no annotations

ar4r2_scaffold_3314_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5816..6910
DNA (1095bp) protein (365aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21) rbh
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV11_9GAMM rbh
ar4r2_scaffold_3314_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6931..7308
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV12_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35205.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_3314_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7308..7901
DNA (594bp) protein (198aa)
16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV13_9GAMM rbh
16S rRNA m(2)G 1207 methyltransferase {ECO:0000313|EMBL:EIJ35206.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
methyltransferase small
ar4r2_scaffold_3314_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7972..8622)
DNA (651bp) protein (217aa)
GTP-binding protein TypA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVX2_9GAMM
GTP-binding protein TypA {ECO:0000313|EMBL:EIJ35515.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
typA_[H]; GTP-binding protein TypA/BipA
Displaying 10 items

View Taxonomy