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ar4r2_scaffold_7638

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_7638_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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76..909
DNA (834bp) protein (278aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117) rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXR6_9GAMM rbh
ar4r2_scaffold_7638_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1088..1783
DNA (696bp) protein (232aa)
Lytic transglycosylase catalytic n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXU1_9GAMM
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EIJ36184.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
soluble lytic murein transglycosylase
ar4r2_scaffold_7638_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1780..3870)
DNA (2091bp) protein (697aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
polyphosphate kinase (EC:2.7.4.1) rbh
Polyphosphate kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXU4_9GAMM rbh
ar4r2_scaffold_7638_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4145..4861
DNA (717bp) protein (239aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXU5_9GAMM rbh
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EIJ36188.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
MotA/TolQ/ExbB proton channel
ar4r2_scaffold_7638_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4858..5283
DNA (426bp) protein (142aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXU6_9GAMM
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EIJ36189.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
biopolymer transport protein ExbD/TolR
ar4r2_scaffold_7638_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5291..7048
DNA (1758bp) protein (586aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXU7_9GAMM rbh
ABC transporter permease
ar4r2_scaffold_7638_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7032..7964
DNA (933bp) protein (311aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXU8_9GAMM rbh
ar4r2_scaffold_7638_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7957..8148
DNA (192bp) protein (64aa)
UPF0434 protein Thini_3688 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXU9_9GAMM
UPF0434 protein Thini_3688 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_7638_9
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8184..9335)
DNA (1152bp) protein (384aa)
transposase IS605 n=1 Tax=Thiothrix flexilis RepID=UPI000377F98B rbh
transposase IS891/IS1136/IS1341 rbh
Transposase IS891/IS1136/IS1341 {ECO:0000313|EMBL:ACO76843.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
ar4r2_scaffold_7638_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9473..10219
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXV0_9GAMM rbh
3-deoxy-manno-octulosonate cytidylyltransferase
ar4r2_scaffold_7638_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10369..10947
DNA (579bp) protein (193aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXV1_9GAMM
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EIJ36194.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
long-chain fatty acid transport protein
Displaying 11 items

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