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ar4r2_scaffold_8908

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_8908_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..542
DNA (540bp) protein (180aa)
RNA polymerase sigma factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPI1_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ECF subfamily RNA polymerase sigma-24 subunit
ar4r2_scaffold_8908_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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583..1188
DNA (606bp) protein (202aa)
Anti sigma-E protein RseA family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPI0_9GAMM
Anti sigma-E protein RseA family protein {ECO:0000313|EMBL:EIJ33273.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_8908_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1172..2062
DNA (891bp) protein (297aa)
Sigma E regulatory protein, MucB/RseB n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH9_9GAMM rbh
Sigma E regulatory protein, MucB/RseB {ECO:0000313|EMBL:EIJ33272.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
sigma E regulatory protein MucB/RseB
ar4r2_scaffold_8908_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2145..2630
DNA (486bp) protein (162aa)
Positive regulator of sigma E, RseC/MucC n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH8_9GAMM
Positive regulator of sigma E, RseC/MucC {ECO:0000313|EMBL:EIJ33271.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Positive regulator of sigma E activity
ar4r2_scaffold_8908_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2694..3812
DNA (1119bp) protein (373aa)
Protease Do n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH7_9GAMM rbh
Protease Do {ECO:0000313|EMBL:EIJ33270.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
peptidase S1C, Do
ar4r2_scaffold_8908_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3799..4056
DNA (258bp) protein (86aa)
Glutaredoxin 2 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH6_9GAMM
Glutaredoxin 2 {ECO:0000313|EMBL:EIJ33269.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
glutaredoxin
ar4r2_scaffold_8908_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4049..5854
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Elongation factor 4 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH5_9GAMM rbh
GTP-binding protein LepA rbh
ar4r2_scaffold_8908_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5873..6637
DNA (765bp) protein (255aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH4_9GAMM rbh
ar4r2_scaffold_8908_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6687..7070
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ33266.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_8908_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7067..7366
DNA (300bp) protein (100aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH2_9GAMM
Displaying 10 items

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