ggKbase home page

ar4r2_scaffold_14511

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_14511_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..470
DNA (468bp) protein (156aa)
Na(+)-translocating NADH-quinone reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Short=Na(+)-NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; Short=Na(+)-translocating NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00427};; NQR complex subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; NQR-1 subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Na(+)-translocating NADH-quinone reductase subunit C n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVS8_9GAMM
nqrC; Na(+)-translocating NADH-quinone reductase subunit C
ar4r2_scaffold_14511_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

467..1063
DNA (597bp) protein (199aa)
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00428, ECO:0000256|SAAS:SAAS00170009}; Short=Na(+)-NQR subunit D {ECO:0000256|HAMAP-Rule:MF_00428};; Short=Na(+)-translocating NQR subunit D {ECO:0000256|HAMAP-Rule:MF_00428};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00428, ECO:0000256|SAAS:SAAS00179330};; NQR complex subunit D {ECO:0000256|HAMAP-Rule:MF_00428}; NQR-1 subunit D {ECO:0000256|HAMAP-Rule:MF_00428}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
NADH:ubiquinone oxidoreductase, subunit D n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVS7_9GAMM rbh
Na(+)-translocating NADH-quinone reductase subunit D
ar4r2_scaffold_14511_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1065..1661
DNA (597bp) protein (199aa)
Na(+)-translocating NADH-quinone reductase subunit E {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00170325}; Short=Na(+)-NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; Short=Na(+)-translocating NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00179335};; NQR complex subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; NQR-1 subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVS6_9GAMM rbh
nqrE; Na(+)-translocating NADH-quinone reductase subunit E rbh
ar4r2_scaffold_14511_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1675..2895
DNA (1221bp) protein (407aa)
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00430};; NQR complex subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; NQR-1 subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Na(+)-translocating NADH-quinone reductase subunit F n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVS5_9GAMM rbh
Na(+)-translocating NADH-quinone reductase subunit F rbh
ar4r2_scaffold_14511_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3332..3748
DNA (417bp) protein (139aa)
Putative signal transduction protein with CBS domains n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVS3_9GAMM
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:EIJ35466.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_14511_6
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3866..4831
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0W1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHQ51448.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
ar4r2_scaffold_14511_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4824..5636
DNA (813bp) protein (271aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQB6_9GAMM
5-hydroxymethyluracil DNA glycosylase
ar4r2_scaffold_14511_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5721..5912)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQB5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ33558.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_14511_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6007..6939
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
tRNA-dihydrouridine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQB4_9GAMM
tRNA-dihydrouridine synthase A rbh
ar4r2_scaffold_14511_trna_1
unknown

Not on your lists

6985..7057
DNA (73bp)
transferRNA Asn
ar4r2_scaffold_14511_10
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7413..7760)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037D1DE0
Uncharacterized protein {ECO:0000313|EMBL:KHL69362.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
hypothetical protein
ar4r2_scaffold_14511_11
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7757..8071)
DNA (315bp) protein (105aa)
integrase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B56C95
Prophage PssSM-03, phage integrase family protein {ECO:0000313|EMBL:KHL69361.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
integrase
Displaying 12 items

View Taxonomy