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ar4r2_scaffold_6185

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_6185_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036D3257
Cfr family radical SAM protein
ar4r2_scaffold_6185_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(268..699)
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ18_9GAMM
ar4r2_scaffold_6185_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(791..2488)
DNA (1698bp) protein (566aa)
AAA-ATPase-like protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU6_9GAMM rbh
AAA-ATPase-like protein {ECO:0000313|EMBL:EIJ35489.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_6185_4
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2543..2707)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00036C6F98
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC61333.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
ar4r2_scaffold_6185_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2841..4517
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ17_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ33460.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_6185_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4514..4888)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYT8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36531.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
conserved hypothetical protein
ar4r2_scaffold_6185_7
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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5001..6170
DNA (1170bp) protein (390aa)
N-6 DNA methylase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFU9_9GAMM rbh
N-6 DNA methylase {ECO:0000313|EMBL:EAW30199.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
N-6 DNA methylase rbh
ar4r2_scaffold_6185_8
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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6232..6888
DNA (657bp) protein (219aa)
Transposase IS4 family protein n=1 Tax=Bacillus coagulans 36D1 RepID=G2TQ20_BACCO
Uncharacterized protein {ECO:0000313|EMBL:KJU84371.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
transposase IS4 family protein
Displaying 8 items

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