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ar4r2_scaffold_5115

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_5115_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..349
DNA (348bp) protein (116aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH4_9GAMM
ar4r2_scaffold_5115_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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399..782
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ33266.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_5115_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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779..1447
DNA (669bp) protein (223aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH2_9GAMM rbh
ar4r2_scaffold_5115_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1444..2343
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH1_9GAMM rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
GTPase Era
ar4r2_scaffold_5115_5
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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2354..3706
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H396_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EXI66625.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hypothetical protein
ar4r2_scaffold_5115_6
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3678..4667
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036D65FF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA92134.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
ar4r2_scaffold_5115_7
unknown

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4702..4932
DNA (231bp) protein (77aa)

This feature has no annotations

ar4r2_scaffold_5115_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4929..5615
DNA (687bp) protein (229aa)
DNA repair protein RecO n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPH0_9GAMM rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
DNA repair protein
ar4r2_scaffold_5115_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5608..6342
DNA (735bp) protein (245aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
pyridoxal phosphate biosynthetic protein PdxJ (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPG9_9GAMM rbh
ar4r2_scaffold_5115_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6339..6722
DNA (384bp) protein (128aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPG8_9GAMM
4'-phosphopantetheinyl transferase
ar4r2_scaffold_5115_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6666..8567)
DNA (1902bp) protein (634aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPG7_9GAMM rbh
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:EIJ33260.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
integral membrane sensor hybrid histidine kinase rbh
ar4r2_scaffold_5115_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8716..9609
DNA (894bp) protein (298aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Cysteine synthase B n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPG6_9GAMM rbh
cysteine synthase B rbh
ar4r2_scaffold_5115_13
unknown

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9725..10120
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying 13 items

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