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ar4r2_scaffold_6879

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_6879_1
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1103)
DNA (1101bp) protein (367aa)
Type I restriction-modification system, DNA adenine N6-methyltransferase subunit n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9S0_GEOBB
type I restriction/modification system N-6 DNA methyltransferase
Type I restriction-modification system, DNA adenine N6-methyltransferase subunit {ECO:0000313|EMBL:ACH40244.2}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
ar4r2_scaffold_6879_2
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1100..3337)
DNA (2238bp) protein (746aa)
Type I restriction-modification system, DNA adenine N6-methyltransferase subunit n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9S0_GEOBB rbh
type I restriction/modification system N-6 DNA methyltransferase rbh
Type I restriction-modification system, DNA adenine N6-methyltransferase subunit {ECO:0000313|EMBL:ACH40244.2}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
ar4r2_scaffold_6879_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3438..3782)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0G5_DESAT
Uncharacterized protein {ECO:0000313|EMBL:CDH44693.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
ar4r2_scaffold_6879_4
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3763..4059)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1C688_9ZZZZ
hypothetical protein
Tax=GWA2_Gallionellales_60_18_curated
ar4r2_scaffold_6879_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4279..4857
DNA (579bp) protein (193aa)
Glutathione peroxidase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPC9_9GAMM rbh
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
glutathione peroxidase
ar4r2_scaffold_6879_6
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4874..6250)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000367A401 rbh
DbpA RNA binding domain family protein {ECO:0000313|EMBL:EEB78472.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
RNA helicase
ar4r2_scaffold_6879_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6364..7287
DNA (924bp) protein (308aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BY12_9GAMM rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIJ36255.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
nucleoside-diphosphate sugar epimerase rbh
ar4r2_scaffold_6879_8
RLO_RIF02_62_27, RIF2, Bacteria

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7602..8669
DNA (1068bp) protein (356aa)
Putative transcriptional regulator with HTH domain n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZQ7_METHD rbh
putative transcriptional regulator with HTH domain rbh
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
ar4r2_scaffold_6879_9
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8760..9278)
DNA (519bp) protein (173aa)
transposase IS4 family protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C2B7
Uncharacterized protein {ECO:0000313|EMBL:GAO27899.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
transposase DDE domain protein
Displaying 9 items

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