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ar4r2_scaffold_6837

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_6837_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2361
DNA (2361bp) protein (787aa)
AMP-dependent synthetase and ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRT9_9GAMM rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIJ34082.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
acyl-CoA synthetase rbh
ar4r2_scaffold_6837_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2356..2796)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Proteobacteria RepID=UPI000366ED33
nucleic acid-binding protein, contains PIN domain
Tax=GWA2_Rhodocyclales_65_20_curated
ar4r2_scaffold_6837_3
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2793..3020)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Proteobacteria RepID=UPI0003660BD2
AbrB family DNA-binding protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
ar4r2_scaffold_6837_4
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3193..3942
DNA (750bp) protein (250aa)
Lipoprotein, putative n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ECW8_GEOBB
lipoprotein
Lipoprotein, putative {ECO:0000313|EMBL:ACH40585.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
ar4r2_scaffold_6837_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3932..4642)
DNA (711bp) protein (237aa)
DNA polymerase III, epsilon subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRW7_9GAMM rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EIJ34110.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
DNA polymerase III subunit epsilon
ar4r2_scaffold_6837_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4639..5082)
DNA (444bp) protein (148aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRW8_9GAMM
ar4r2_scaffold_6837_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5072..5902)
DNA (831bp) protein (277aa)
Methyltransferase type 11 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRW9_9GAMM rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EIJ34112.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
methyltransferase type 11
ar4r2_scaffold_6837_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5982..7166
DNA (1185bp) protein (395aa)
Lytic transglycosylase catalytic n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX0_9GAMM rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EIJ34113.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_6837_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7169..7780
DNA (612bp) protein (204aa)
FHA domain containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX1_9GAMM
FHA domain containing protein {ECO:0000313|EMBL:EIJ34114.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
FHA domain-containing protein
ar4r2_scaffold_6837_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7761..8360
DNA (600bp) protein (200aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX2_9GAMM
5-formyltetrahydrofolate cyclo-ligase
ar4r2_scaffold_6837_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8450..8899
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34116.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ar4r2_scaffold_6837_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8993..9736
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34117.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_6837_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9800..10648
DNA (849bp) protein (283aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRX5_9GAMM rbh
hypothetical protein rbh
ar4r2_scaffold_6837_14
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10665..10985
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNF3_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73844.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Displaying 14 items

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