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ar4r2_scaffold_7519

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_7519_1
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1308
DNA (1308bp) protein (436aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35) rbh
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000373C212 rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AKH19334.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
ar4r2_scaffold_7519_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1320..2987
DNA (1668bp) protein (556aa)
AMP-dependent synthetase and ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSG5_9GAMM rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIJ34308.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
AMP-dependent synthetase and ligase rbh
ar4r2_scaffold_7519_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3090..5318)
DNA (2229bp) protein (743aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
methionine synthase (B12-independent) (EC:2.1.1.14) rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQF6_9GAMM rbh
ar4r2_scaffold_7519_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5418..6320
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQF4_9GAMM rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EIJ33597.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
transcriptional regulator, fis family
ar4r2_scaffold_7519_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6360..8054)
DNA (1695bp) protein (565aa)
AAA-ATPase-like protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BVU6_9GAMM
AAA-ATPase-like protein {ECO:0000313|EMBL:EIJ35489.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_7519_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8102..8512)
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Ribonuclease VapC n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF45_NITHX
PilT protein-like
ar4r2_scaffold_7519_7
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8509..8775)
DNA (267bp) protein (89aa)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_7519_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8867..9421)
DNA (555bp) protein (185aa)
Patatin n=1 Tax=Rhodanobacter denitrificans RepID=I4WN06_9GAMM
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AGG90864.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 8 items

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