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ar4r2_scaffold_4950_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(1527..2309)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 258.0
  • Bit_score: 433
  • Evalue 1.30e-118
tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 257.0
  • Bit_score: 308
  • Evalue 1.60e-81
  • rbh
tRNA pseudouridine synthase A n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXR2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 258.0
  • Bit_score: 433
  • Evalue 8.90e-119
  • rbh

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGAAATTTGCAGCGTGTATTGAATACGATGGAACCCCGTTTTACGGCTGGCAGCGTTTGAGCCACGGCTCAACGGTACAAGCACACGTGGAACAAGCCTTGTCGCAAGTGGCGGCAGAACCGATTAGCGTGGTCTGTGCAGGGCGTACTGATAGTGGTGTGCATGGTGTGGGGCAGGTCATTCATTTTGAAACTGCGGCGGTGCGTCCTGAGCGTGGCTGGTTGTTTGGGACGAATGCGCATTTGCCGGATGCGATTGCTATGCGTTGGATTCAACCTGTGGGCGATGATTTTCACGCGCGATTTTCGGCACGTTTCCGGCGGTATCGTTACATTATTTTGAATCGTGCGGCACGCCCCGCAATTTTACAAGGTCGGGTGTATTGGCAATACGCCCCACTGGATGCCGAGGCGATGCACTGGGCAGCACAGGCATTAGTCGGTGAACACGATTTTTCGAGTTTTCGCGCGGCTGGGTGTCAGGCACGTCATGCGGTGCGTGAGATCATGGAGGTGCGGGTGTCGCGTGAGCAGGATTTTATCCACGTGGATATTGTTGCGAATGCTTTTTTGCACCACATGGTCAGAAACATCGTTGGTTCTTTACTGAAAGTGGGGGCGGCAGAGCGTCCAGTCACGTGGATTGCAACCTTGTTAGCGCAACGTGATCGCACCCTCGCTGGCATGACTGCTCCGGCGGCGGGTTTGTATTTTGTTTATGTGGATTATCCCGCACATTTTGGATTGCCGACCAGGTACACATTACCTGCGTATCAAAGCTAA
PROTEIN sequence
Length: 261
MKFAACIEYDGTPFYGWQRLSHGSTVQAHVEQALSQVAAEPISVVCAGRTDSGVHGVGQVIHFETAAVRPERGWLFGTNAHLPDAIAMRWIQPVGDDFHARFSARFRRYRYIILNRAARPAILQGRVYWQYAPLDAEAMHWAAQALVGEHDFSSFRAAGCQARHAVREIMEVRVSREQDFIHVDIVANAFLHHMVRNIVGSLLKVGAAERPVTWIATLLAQRDRTLAGMTAPAAGLYFVYVDYPAHFGLPTRYTLPAYQS*