ggKbase home page

ar4r2_scaffold_4950

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_4950_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

ar4r2_scaffold_4950_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97..441)
DNA (345bp) protein (115aa)
Protein RnfH 2 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYY7_9GAMM
UPF0125 protein Thini_4088 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_4950_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(422..859)
DNA (438bp) protein (146aa)
Cyclase/dehydrase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYY8_9GAMM
Cyclase/dehydrase {ECO:0000313|EMBL:EIJ36581.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
cyclase/dehydrase
ar4r2_scaffold_4950_4
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(948..1460)
DNA (513bp) protein (171aa)
Predicted membrane protein/domain n=1 Tax=Vibrio sp. AND4 RepID=A8T2X8_9VIBR
RDD family protein {ECO:0000313|EMBL:KDN24564.1}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella bovoculi 237.;"
putative RDD protein
ar4r2_scaffold_4950_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1527..2309)
DNA (783bp) protein (261aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
tRNA pseudouridine synthase A (EC:4.2.1.70) rbh
tRNA pseudouridine synthase A n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXR2_9GAMM rbh
ar4r2_scaffold_4950_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2381..5614)
DNA (3234bp) protein (1078aa)
FimV N-terminal domain-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXR1_9GAMM rbh
FimV N-terminal domain-containing protein {ECO:0000313|EMBL:EIJ36154.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
Tfp pilus assembly protein FimV-like protein
ar4r2_scaffold_4950_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5850..6587)
DNA (738bp) protein (246aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXR0_9GAMM
Displaying 7 items

View Taxonomy