ggKbase home page

ar4r2_scaffold_1636_4

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: 1615..2055

Top 3 Functional Annotations

Value Algorithm Source
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 141.0
  • Bit_score: 226
  • Evalue 1.70e-56
GDP-L-fucose synthase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4Q2_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 141.0
  • Bit_score: 226
  • Evalue 1.20e-56
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 141.0
  • Bit_score: 226
  • Evalue 3.40e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGCCGACCAATTTGTACGGACCGAATGATAATTATGATTTGGCGACGAGCCATGTGTTGCCTGCGTTGTTGCGCAAGGCGCATGAGGCGAAGTTGCGTGGGGATCAGGAATTGGTGGTGTGGGGTTCGGGTACGCCACGGCGCGAGTTTTTGTATGTGGATGATTTGGCGGATGCGTGTGTGTTTTTGATGGAGCGGGGCTATGCGGGGTCGTTGTTGAATATTGGTACGGGGCAAGATGTGACTATTCGGGAATTGGCAGAGACGATTATGGATGTGGTGGGGTTTACGGGGCGGATTGTGTTTGATGCGAGTAAGCCGGATGGGACGATGCGGAAAGTGTTGGATGTTTCACAGTTAAACGCCCAAAATTGGCAAGCCAGTAAGTCTCTGTCTGCGGGAATTGCCGATACTTACAAGGCTTATAGGTCTACACTATAA
PROTEIN sequence
Length: 147
MPTNLYGPNDNYDLATSHVLPALLRKAHEAKLRGDQELVVWGSGTPRREFLYVDDLADACVFLMERGYAGSLLNIGTGQDVTIRELAETIMDVVGFTGRIVFDASKPDGTMRKVLDVSQLNAQNWQASKSLSAGIADTYKAYRSTL*