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ar4r2_scaffold_1636

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1636_1
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..302)
DNA (300bp) protein (100aa)
IS1 transposase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3ITM9_9GAMM
IS1 transposase {ECO:0000313|EMBL:EGW21439.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
IS1 transposase
ar4r2_scaffold_1636_2
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(320..559)
DNA (240bp) protein (80aa)
Insertion element protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IUX9_9GAMM
Insertion element protein {ECO:0000313|EMBL:EGW21664.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
insertion element protein
ar4r2_scaffold_1636_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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609..1205
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXA9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ36002.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_1636_4
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1615..2055
DNA (441bp) protein (147aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
GDP-L-fucose synthase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4Q2_LEPCP
NAD-dependent epimerase/dehydratase
ar4r2_scaffold_1636_5
Sulfurovum lithotrophicum, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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2086..3441
DNA (1356bp) protein (452aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF24138.1}; TaxID=206403 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum lithotrophicum.;"
Divergent AAA region id=3124737 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
ATP-dependent DNA helicase
ar4r2_scaffold_1636_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3455..4036
DNA (582bp) protein (194aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZ56_9GAMM
spore coat protein
ar4r2_scaffold_1636_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4056..5222
DNA (1167bp) protein (389aa)
Nucleotide sugar dehydrogenase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BS63_9GAMM rbh
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EIJ34206.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
nucleotide sugar dehydrogenase rbh
ar4r2_scaffold_1636_8
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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5532..6779
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037F27A4 rbh
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KFD81304.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
putative polysaccharide biosynthesis protein
ar4r2_scaffold_1636_9
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6769..7938
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037354E9 rbh
Glycosyl transferase family 2
Uncharacterized protein {ECO:0000313|EMBL:CCO12014.2}; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium maltaromaticum LMA28.;"
ar4r2_scaffold_1636_10
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7935..8618
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI000371FAC7
Acetyltransferase (isoleucine patch superfamily)
Acetyltransferase, CYSE/LACA/LPXA/NODL family {ECO:0000313|EMBL:CEG33841.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
ar4r2_scaffold_1636_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8605..9918
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HSG3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS06968.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
ar4r2_scaffold_1636_12
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9939..11177
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ERT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95390.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
glycosyl transferase family 1
ar4r2_scaffold_1636_13
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11174..12205
DNA (1032bp) protein (344aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Pseudomonas sp. GM55 RepID=J2T693_9PSED rbh
Strain MEJ086 contig_29, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00077.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
polysaccharide biosynthesis protein rbh
ar4r2_scaffold_1636_14
Pseudomonas sp., Proteobacteria, Bacteria

Not on your lists

12209..13321
DNA (1113bp) protein (371aa)
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZN9_AROAE rbh
NAD dependent epimerase/dehydratase rbh
UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
ar4r2_scaffold_1636_15
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13323..14453
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003088B07 rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KJK21043.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
rffE; UDP-N-acetylglucosamine 2-epimerase rbh
ar4r2_scaffold_1636_16
Pseudomonas sp. 20_BN, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14458..15684
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI0003076292 rbh
Putative glycosyltransferase {ECO:0000313|EMBL:CDZ94619.1}; TaxID=1499686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 20_BN.;"
group 1 glycosyl transferase rbh
ar4r2_scaffold_1636_17
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15754..16389
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B1J7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KJS31503.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
sugar transferase
ar4r2_scaffold_1636_18
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16373..17353
DNA (981bp) protein (327aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
Formyl transferase domain-containing protein n=1 Tax=Vibrio splendidus ATCC 33789 RepID=F9SJ41_VIBSP
formyl transferase domain-containing protein
ar4r2_scaffold_1636_19
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

17340..18020
DNA (681bp) protein (227aa)
LmbE family protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QVK3_CHLT3
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ACF14603.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
ar4r2_scaffold_1636_20
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18121..18468
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036D1DC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57852.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Displaying 20 items

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